Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06025 Striga asiatica HOM05D000257 ORTHO05D404083 5.0e-54 214.2 106 100.0
SGA_v2.0_scaffold199G41255 Striga asiatica HOM05D000257 ORTHO05D009178 1.3e-14 83.2 108 47.2
Oeu002676.1 Olea europaea HOM05D000257 ORTHO05D009178 1.4e-11 73.2 105 44.8
MSTRG.15616 Avicennia marina HOM05D000257 ORTHO05D009178 5.2e-11 71.2 103 43.7
PGSC0003DMG401017729 Solanum tuberosum HOM05D000257 ORTHO05D009178 6.8e-11 70.9 113 41.6
Hma1.2p1_0085F.1_g043930 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 2.0e-10 69.3 116 39.7
Hma1.2p1_0085F.1_g043940 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 2.0e-10 69.3 116 39.7
Hma1.2p1_0085F.1_g043990 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 2.0e-10 69.3 116 39.7
Actinidia33002 Actinidia chinensis HOM05D000257 ORTHO05D009178 4.4e-10 68.2 111 40.5
Ah.04g150860 Amaranthus hybridus HOM05D000257 ORTHO05D009178 4.4e-10 68.2 99 43.4
CAN.G809.81 Capsicum annuum HOM05D000257 ORTHO05D009178 4.4e-10 68.2 113 40.7
Nitab4.5_0000108g0040 Nicotiana tabacum HOM05D000257 ORTHO05D009178 4.4e-10 68.2 105 42.9
Nitab4.5_0006392g0070 Nicotiana tabacum HOM05D000257 ORTHO05D009178 4.4e-10 68.2 116 41.4
AUR62004731 Chenopodium quinoa HOM05D000257 ORTHO05D009178 5.8e-10 67.8 117 38.5
Migut.I00362 Erythranthe guttata HOM05D000257 ORTHO05D009178 5.8e-10 67.8 117 39.3
Solyc02g081530.1 Solanum lycopersicum HOM05D000257 ORTHO05D009178 5.8e-10 67.8 108 41.7
Sopen02g026160 Solanum pennellii HOM05D000257 ORTHO05D009178 5.8e-10 67.8 113 40.7
AUR62037529 Chenopodium quinoa HOM05D000257 ORTHO05D009178 9.9e-10 67.0 99 41.4
SalBow5G0247 Salvia bowleyana HOM05D000257 ORTHO05D009178 9.9e-10 67.0 103 41.7
CSS0040955 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D009178 1.3e-09 66.6 111 42.3
Ciclev10018363m.g Citrus clementina HOM05D000257 ORTHO05D009178 1.3e-09 66.6 115 40.0
Peaxi162Scf00344g01711 Petunia axillaris HOM05D000257 ORTHO05D009178 1.7e-09 66.2 113 39.8
Aqoxy1G01888 Aquilegia oxysepala HOM05D000257 ORTHO05D009178 2.9e-09 65.5 113 38.9
Ca_15103_v3 Cicer arietinum L. HOM05D000257 ORTHO05D009178 6.4e-09 64.3 110 40.9
Hund28145 Selenicereus undatus HOM05D000257 ORTHO05D009178 6.4e-09 64.3 99 41.4
Hund28148 Selenicereus undatus HOM05D000257 ORTHO05D009178 6.4e-09 64.3 99 41.4
Psat5g144760 Pisum sativum HOM05D000257 ORTHO05D009178 1.1e-08 63.5 125 38.4
AUR62039037 Chenopodium quinoa HOM05D000257 ORTHO05D009178 1.9e-08 62.8 99 39.4
MBI06_g27511_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009178 1.9e-08 62.8 111 38.7
Nn4g25087 Nelumbo nucifera HOM05D000257 ORTHO05D009178 2.4e-08 62.4 41 75.6
Sc07g0001480 Simmondsia chinensis HOM05D000257 ORTHO05D009178 2.4e-08 62.4 97 41.2
TAR381G1111 Trochodendron aralioides HOM05D000257 ORTHO05D009178 2.4e-08 62.4 40 77.5
TAR629G0879 Trochodendron aralioides HOM05D000257 ORTHO05D009178 2.4e-08 62.4 40 77.5
QL03p016896 Quercus lobata HOM05D000257 ORTHO05D009178 4.1e-08 61.6 105 39.0
Cc07_g12550 Coffea canephora HOM05D000257 ORTHO05D009178 5.4e-08 61.2 105 40.0
HanXRQChr05g0144031 Helianthus annuus HOM05D000257 ORTHO05D009178 7.1e-08 60.8 121 35.5
Lj6g0000577 Lotus japonicus HOM05D000257 ORTHO05D009178 7.1e-08 60.8 116 37.1
Lsat_1_v5_gn_8_63660 Lactuca sativa HOM05D000257 ORTHO05D009178 9.2e-08 60.5 37 81.1
Lj2P390T23 Lonicera japonica HOM05D000257 ORTHO05D009178 9.2e-08 60.5 114 39.5
EL10Ac3g07268 Beta vulgaris HOM05D000257 ORTHO05D009178 1.2e-07 60.1 107 39.3
Lalb_Chr15g0085471 Lupinus albus HOM05D000257 ORTHO05D009178 1.6e-07 59.7 105 40.0
Sed0011629 Sechium edule HOM05D000257 ORTHO05D009178 1.6e-07 59.7 99 39.4
vmacro20435 Vaccinium macrocarpon HOM05D000257 ORTHO05D009178 2.1e-07 59.3 113 39.8
DCAR_003386 Daucus carota HOM05D000257 ORTHO05D009178 4.6e-07 58.2 41 70.7
Medtr3g063230 Medicago truncatula HOM05D000257 ORTHO05D009178 4.6e-07 58.2 105 38.1
GSVIVG01033205001 Vitis vinifera HOM05D000257 ORTHO05D009178 4.6e-07 58.2 37 78.4
ClCG03G014220 Citrullus lanatus HOM05D000257 ORTHO05D009178 6.0e-07 57.8 99 38.4
ECA236G3979 Erigeron canadensis HOM05D000257 ORTHO05D009178 6.0e-07 57.8 109 36.7
CARHR006050 Cardamine hirsuta HOM05D000257 ORTHO05D009178 7.8e-07 57.4 102 39.2
Carub.0001s0580 Capsella rubella HOM05D000257 ORTHO05D009178 1.0e-06 57.0 101 40.6
CiPaw.06G064100 Carya illinoinensis HOM05D000257 ORTHO05D009178 1.0e-06 57.0 41 70.7
Eucgr.A02603 Eucalyptus grandis HOM05D000257 ORTHO05D009178 1.0e-06 57.0 92 41.3
AL1G16450 Arabidopsis lyrata HOM05D000257 ORTHO05D009178 1.3e-06 56.6 101 39.6
CANSAT01G2405 Cannabis sativa HOM05D000257 ORTHO05D009178 1.3e-06 56.6 37 75.7
CDE07G1348 Ceratophyllum demersum HOM05D000257 ORTHO05D009178 1.3e-06 56.6 37 73.0
Rhsim10G0187400 Rhododendron simsii HOM05D000257 ORTHO05D009178 1.3e-06 56.6 41 73.2
Dinv42707 Davidia involucrata HOM05D000257 ORTHO05D009178 1.7e-06 56.2 41 70.7
Sabra02G0186500 Salix brachista HOM05D000257 ORTHO05D009178 1.7e-06 56.2 105 36.2
Phvul.006G083700 Phaseolus vulgaris HOM05D000257 ORTHO05D009178 2.3e-06 55.8 41 70.7
Prupe.4G102100 Prunus persica HOM05D000257 ORTHO05D009178 2.3e-06 55.8 41 68.3
Atru.chr6.2753 Acer truncatum HOM05D000257 ORTHO05D009178 3.9e-06 55.1 41 70.7
GSVIVG01020990001 Vitis vinifera HOM05D000257 ORTHO05D009178 3.9e-06 55.1 37 75.7
ATR0618G155 Amborella trichopoda HOM05D000257 ORTHO05D009178 5.1e-06 54.7 37 73.0
MELO3C015617.2 Cucumis melo HOM05D000257 ORTHO05D009178 5.1e-06 54.7 37 70.3
CsaV3_1G042010 Cucumis sativus L. HOM05D000257 ORTHO05D009178 5.1e-06 54.7 37 70.3
FvH4_3g11420 Fragaria vesca HOM05D000257 ORTHO05D009178 5.1e-06 54.7 118 33.9
AT1G06440 Arabidopsis thaliana HOM05D000257 ORTHO05D009178 6.6e-06 54.3 101 37.6
PGR004G2170 Punica granatum HOM05D000257 ORTHO05D009178 6.6e-06 54.3 37 70.3
SHI31601 Sapria himalayana HOM05D000257 ORTHO05D009178 6.6e-06 54.3 37 73.0
Glyma.11G203100 Glycine max HOM05D000257 ORTHO05D009178 8.6e-06 53.9 41 68.3
Zm00001eb043780 Zea mays HOM05D000257 ORTHO05D009178 8.6e-06 53.9 40 65.0


User provided reference genes

Program Settings