Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 2.8e-137 491.9 236 100.0
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 3.4e-71 272.3 132 100.0
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 2.8e-41 172.9 144 66.7
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 8.6e-14 81.6 118 39.0
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 8.6e-14 81.6 118 39.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 7.3e-13 78.6 111 39.6
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 2.1e-12 77.0 74 51.4
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.1e-12 77.0 119 37.8
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 4.7e-12 75.9 94 44.7
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 4.7e-12 75.9 112 43.8
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 2.3e-11 73.6 138 37.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.2e-11 72.4 118 37.3
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 6.8e-11 72.0 118 38.1
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 8.9e-11 71.6 118 39.0
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.2e-10 71.2 119 37.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.5e-10 70.9 79 45.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.5e-10 70.9 86 44.2
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.5e-10 70.9 109 39.4
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.5e-10 70.9 95 42.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.6e-10 70.1 97 40.2
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.6e-10 70.1 114 39.5
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 3.4e-10 69.7 127 37.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.7e-09 67.4 133 36.8
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.7e-09 67.4 100 36.0
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.9e-09 65.9 115 36.5
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.9e-09 65.9 92 41.3
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.4e-08 64.3 92 38.0
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 1.4e-08 64.3 112 33.9
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.4e-08 63.5 97 39.2
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.1e-08 62.8 104 35.6
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 7.1e-08 62.0 96 34.4
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 7.1e-08 62.0 76 44.7
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 9.2e-08 61.6 90 40.0
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.6e-07 60.8 95 38.9
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 1.6e-07 60.8 79 40.5
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.1e-07 60.5 56 44.6
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 2.7e-07 60.1 75 40.0
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 2.7e-07 60.1 95 37.9
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 2.7e-07 60.1 78 39.7
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.6e-07 59.3 80 38.8
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 6.0e-07 58.9 69 44.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 7.8e-07 58.5 130 31.5
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.0e-06 58.2 70 40.0
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.0e-06 58.2 72 44.4
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.3e-06 57.8 91 33.0
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 1.7e-06 57.4 79 38.0
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 2.3e-06 57.0 89 33.7
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 2.3e-06 57.0 89 33.7
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 6.6e-06 55.5 117 31.6
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 6.6e-06 55.5 88 38.6
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 6.6e-06 55.5 91 34.1
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.6e-06 55.1 48 43.8
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 8.6e-06 55.1 63 39.7
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 8.6e-06 55.1 88 36.4


User provided reference genes

Program Settings