Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 1.6e-233 812.4 399 100.0
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.4e-125 453.0 388 61.1
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 6.4e-118 428.3 389 55.3
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 8.3e-118 427.9 383 56.1
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.9e-115 419.5 384 56.5
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.7e-113 412.1 381 56.7
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.5e-111 407.1 386 56.2
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.0e-111 406.8 382 55.2
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 3.4e-111 406.0 387 54.5
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.9e-110 402.9 392 55.4
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.4e-109 399.8 385 55.1
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.7e-108 396.4 387 53.2
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 4.6e-108 395.6 384 54.2
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.1e-106 391.0 393 52.4
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 2.1e-105 386.7 384 53.4
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.8e-105 386.3 387 52.5
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 4.7e-105 385.6 386 54.7
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 6.2e-105 385.2 377 53.1
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.1e-104 384.4 383 52.5
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 3.4e-103 379.4 388 53.9
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 7.5e-103 378.3 386 53.4
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 2.4e-101 373.2 383 51.7
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 2.1e-100 370.2 387 52.7
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 2.1e-100 370.2 389 50.9
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.3e-99 367.5 392 49.0
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.3e-99 367.5 392 49.5
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.3e-99 367.5 382 52.1
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.7e-99 367.1 387 51.4
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 3.0e-99 366.3 383 51.4
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 5.1e-99 365.5 393 50.1
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.9e-98 363.6 383 50.9
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.9e-98 363.6 392 48.7
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 5.6e-98 362.1 382 49.5
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 1.6e-97 360.5 382 49.7
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.8e-97 359.8 384 50.3
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 8.1e-97 358.2 389 51.9
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 8.9e-96 354.8 389 51.7
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 3.4e-95 352.8 393 49.1
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 1.3e-94 350.9 384 50.3
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 4.1e-93 345.9 360 52.5
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 5.4e-93 345.5 393 47.8
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 5.4e-93 345.5 392 48.5
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 5.4e-93 345.5 387 50.6
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.2e-92 344.4 383 48.8
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 2.7e-92 343.2 385 50.1
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 2.3e-91 340.1 393 48.1
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.1e-90 337.8 388 48.5
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 3.3e-90 336.3 388 48.5
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.3e-90 335.9 384 47.1
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 7.3e-90 335.1 382 47.6
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 1.2e-89 334.3 384 48.4
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 1.2e-89 334.3 383 47.8
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.6e-89 334.0 387 48.3
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.6e-89 334.0 383 48.6
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 2.8e-89 333.2 382 48.4
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 3.6e-89 332.8 382 47.1
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 4.7e-89 332.4 384 46.4
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.2e-89 332.0 382 48.2
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.1e-88 331.3 385 48.1
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.1e-88 329.7 382 46.9
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 3.1e-88 329.7 392 46.7
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 4.0e-88 329.3 390 48.5
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 8.9e-88 328.2 382 47.4
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.5e-87 327.4 392 46.7
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.0e-87 327.0 387 47.0
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 2.0e-87 327.0 390 48.5
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 2.0e-87 327.0 388 48.5
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 2.6e-87 326.6 382 47.6
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 4.4e-87 325.9 391 46.8
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 1.7e-86 323.9 382 46.9
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 2.2e-86 323.6 391 49.1
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 2.9e-86 323.2 387 46.8
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 4.9e-86 322.4 381 47.8
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.4e-85 320.1 388 46.9
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 7.1e-85 318.5 406 45.3
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 9.3e-85 318.2 393 46.3
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 9.3e-85 318.2 393 46.3
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.6e-84 317.4 385 46.8
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 3.5e-84 316.2 403 44.9
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 6.0e-84 315.5 380 45.0
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 7.8e-84 315.1 387 45.7
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 1.0e-83 314.7 387 45.7
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.0e-83 314.7 387 45.7
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 3.0e-83 313.2 403 44.9
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 6.6e-83 312.0 387 46.0
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 1.1e-82 311.2 388 45.6
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.5e-82 310.1 401 44.4
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 5.6e-82 308.9 388 46.4
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 1.6e-81 307.4 383 45.4
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 4.8e-81 305.8 397 45.1
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.2e-79 301.2 407 44.7
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 7.6e-79 298.5 331 49.5
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.7e-78 297.4 384 42.7
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 6.0e-76 288.9 358 45.8
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 5.6e-74 282.3 383 41.8
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 4.5e-71 272.7 367 46.0
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.4e-69 267.7 323 44.9
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 9.3e-69 265.0 364 44.5
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.4e-64 250.4 389 40.4
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 3.1e-64 250.0 389 40.4
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 4.0e-64 249.6 390 40.0
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 4.0e-64 249.6 390 41.0
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 4.0e-64 249.6 394 37.8
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 1.5e-63 247.7 392 39.5
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 2.2e-62 243.8 387 37.7
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.9e-62 243.4 395 40.3
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.9e-61 240.7 382 36.1
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 3.2e-61 240.0 396 40.2
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.2e-61 240.0 397 36.8
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 9.3e-61 238.4 411 35.3
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 3.5e-60 236.5 398 38.2
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 1.3e-59 234.6 388 38.1
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 2.3e-59 233.8 399 38.3
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 1.1e-56 224.9 386 38.6
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 6.9e-56 222.2 149 75.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.6e-55 220.3 274 46.4
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 5.9e-55 219.2 386 38.1
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.7e-54 217.6 394 34.5
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 8.7e-51 205.3 252 47.6
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 5.7e-50 202.6 246 44.3
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 4.8e-49 199.5 352 37.5
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 2.4e-48 197.2 364 36.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 3.2e-37 160.2 284 36.6
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.5e-37 159.5 330 34.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 7.4e-34 149.1 367 29.2
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 4.0e-27 126.7 133 49.6


User provided reference genes

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