Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold129G34157 Striga asiatica HOM05D046958 ORTHO05D025248 5.4e-59 230.7 111 100.0
SGA_v2.0_scaffold5289G54624 Striga asiatica HOM05D046958 ORTHO05D025248 2.1e-42 175.6 86 97.7
SGA_v2.0_scaffold132G34549 Striga asiatica HOM05D000026 ORTHO05D001436 4.9e-20 101.3 65 78.5
Migut.D02008 Erythranthe guttata HOM05D000026 ORTHO05D001436 6.3e-15 84.3 90 54.4
Solyc02g068300.3 Solanum lycopersicum HOM05D000026 ORTHO05D001436 6.5e-12 74.3 83 48.2
Sopen02g017400 Solanum pennellii HOM05D000026 ORTHO05D001436 6.5e-12 74.3 83 48.2
PGSC0003DMG401009415 Solanum tuberosum HOM05D000026 ORTHO05D001436 8.5e-12 73.9 83 49.4
Peaxi162Scf00981g00110 Petunia axillaris HOM05D000026 ORTHO05D001436 1.1e-11 73.6 89 46.1
CAN.G883.11 Capsicum annuum HOM05D000026 ORTHO05D001436 3.2e-11 72.0 83 48.2
Nitab4.5_0011544g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.2e-11 72.0 83 47.0
Oeu023347.1 Olea europaea HOM05D000026 ORTHO05D001436 3.2e-11 72.0 94 47.9
Actinidia35693 Actinidia chinensis HOM05D000026 ORTHO05D001436 9.4e-11 70.5 90 47.8
Nitab4.5_0000304g0060 Nicotiana tabacum HOM05D000026 ORTHO05D001436 2.7e-10 68.9 64 54.7
Nitab4.5_0012341g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 2.7e-10 68.9 83 49.4
vmacro18481 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 6.1e-10 67.8 88 48.9
Solyc03g031980.4 Solanum lycopersicum HOM05D000026 ORTHO05D001436 7.9e-10 67.4 60 55.0
PGSC0003DMG400018677 Solanum tuberosum HOM05D000026 ORTHO05D001436 1.0e-09 67.0 85 44.7
Cc07_g12360 Coffea canephora HOM05D000026 ORTHO05D001436 2.3e-09 65.9 61 59.0
Sopen03g005830 Solanum pennellii HOM05D000026 ORTHO05D001436 2.3e-09 65.9 60 53.3
Sopen12g018640 Solanum pennellii HOM05D000026 ORTHO05D001436 2.3e-09 65.9 60 53.3
Dinv19110 Davidia involucrata HOM05D000026 ORTHO05D001436 3.9e-09 65.1 68 55.9
Nitab4.5_0007373g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.9e-09 65.1 68 48.5
Hund03556 Selenicereus undatus HOM05D000026 ORTHO05D001436 5.1e-09 64.7 72 56.9
CAN.G801.16 Capsicum annuum HOM05D000026 ORTHO05D001436 1.5e-08 63.2 87 46.0
Nitab4.5_0000304g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.9e-08 62.8 59 55.9
Eucgr.L02496 Eucalyptus grandis HOM05D000026 ORTHO05D001436 2.5e-08 62.4 55 58.2
Sabra11G0131400 Salix brachista HOM05D000026 ORTHO05D001436 2.5e-08 62.4 72 50.0
Potri.001G455500 Populus trichocarpa HOM05D000026 ORTHO05D001436 4.3e-08 61.6 62 51.6
CANSAT56G1422 Cannabis sativa HOM05D000026 ORTHO05D001436 5.7e-08 61.2 86 44.2
Potri.011G146500 Populus trichocarpa HOM05D000026 ORTHO05D001436 5.7e-08 61.2 72 50.0
Dinv28287 Davidia involucrata HOM05D000026 ORTHO05D001436 9.7e-08 60.5 63 55.6
Sabra16G0308100 Salix brachista HOM05D000026 ORTHO05D001436 9.7e-08 60.5 72 48.6
RcHm_v2.0_Chr2g0096621 Rosa chinensis HOM05D000026 ORTHO05D001436 1.3e-07 60.1 70 48.6
Hma1.2p1_0085F.1_g044200 Hydrangea macrophylla HOM05D000026 ORTHO05D001436 2.2e-07 59.3 84 42.9
AUR62003328 Chenopodium quinoa HOM05D000026 ORTHO05D001436 2.8e-07 58.9 98 43.9
Nitab4.5_0004507g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 2.8e-07 58.9 79 41.8
MBI04_g23328_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D001436 3.7e-07 58.5 84 39.3
Nitab4.5_0002860g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.7e-07 58.5 79 41.8
Nitab4.5_0008108g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.8e-07 58.2 59 50.8
AUR62029521 Chenopodium quinoa HOM05D000026 ORTHO05D001436 6.3e-07 57.8 81 49.4
Cfa007122 Carpinus fangiana HOM05D000026 ORTHO05D001436 1.1e-06 57.0 53 54.7
Eucgr.I02186 Eucalyptus grandis HOM05D000026 ORTHO05D001436 1.4e-06 56.6 89 39.3
Lj2g0015695 Lotus japonicus HOM05D000026 ORTHO05D001436 1.4e-06 56.6 93 41.9
PGR119G1866 Punica granatum HOM05D000026 ORTHO05D001436 1.4e-06 56.6 69 52.2
Thecc.04G122600 Theobroma cacao HOM05D000026 ORTHO05D001436 1.4e-06 56.6 80 47.5
Haze_03651 Corylus avellana HOM05D000026 ORTHO05D001436 1.8e-06 56.2 53 54.7
TWI09G0726 Tripterygium wilfordii HOM05D000026 ORTHO05D001436 1.8e-06 56.2 57 56.1
GSVIVG01026418001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.8e-06 56.2 87 43.7
Dinv23636 Davidia involucrata HOM05D043598 ORTHO05D025248 2.4e-06 55.8 55 56.4
Manes.02G117800 Manihot esculenta HOM05D000026 ORTHO05D001436 2.4e-06 55.8 72 50.0
QL06p053545 Quercus lobata HOM05D000026 ORTHO05D001436 2.4e-06 55.8 76 50.0
Hund19675 Selenicereus undatus HOM05D000026 ORTHO05D001436 2.4e-06 55.8 58 56.9
Actinidia17135 Actinidia chinensis HOM05D000026 ORTHO05D001436 3.1e-06 55.5 62 46.8
Gohir.A07G076600 Gossypium hirsutum HOM05D000026 ORTHO05D001436 3.1e-06 55.5 86 45.3
Nn6g31574 Nelumbo nucifera HOM05D000026 ORTHO05D001436 3.1e-06 55.5 73 39.7
RhsimUnG0057900 Rhododendron simsii HOM05D000026 ORTHO05D001436 3.1e-06 55.5 87 42.5
ATR0605G290 Amborella trichopoda HOM05D000026 ORTHO05D001436 4.1e-06 55.1 58 46.6
Eucgr.H03724 Eucalyptus grandis HOM05D000026 ORTHO05D001436 4.1e-06 55.1 88 38.6
Eucgr.I02181 Eucalyptus grandis HOM05D000026 ORTHO05D001436 5.3e-06 54.7 94 41.5
Eucgr.J02577 Eucalyptus grandis HOM05D000026 ORTHO05D001436 5.3e-06 54.7 55 56.4
Prupe.7G188700 Prunus persica HOM05D000026 ORTHO05D001436 5.3e-06 54.7 66 48.5
EL10Ac6g14720 Beta vulgaris HOM05D000026 ORTHO05D001436 6.9e-06 54.3 68 48.5
Peaxi162Scf00918g00415 Petunia axillaris HOM05D000026 ORTHO05D001436 6.9e-06 54.3 60 53.3
Rhsim10G0190000 Rhododendron simsii HOM05D000026 ORTHO05D001436 6.9e-06 54.3 56 46.4
Gohir.D07G081400 Gossypium hirsutum HOM05D000026 ORTHO05D001436 9.1e-06 53.9 86 44.2
Gorai.001G086500 Gossypium raimondii HOM05D000026 ORTHO05D001436 9.1e-06 53.9 86 44.2


User provided reference genes

Program Settings