Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold128G34095 Striga asiatica HOM05D020090 ORTHO05D021022 2.1e-189 665.6 350 100.0
SGA_v2.0_scaffold100G29656 Striga asiatica HOM05D020090 ORTHO05D021022 4.2e-89 332.4 236 80.5
SGA_v2.0_scaffold670G53419 Striga asiatica HOM05D020090 ORTHO05D021022 1.3e-79 300.8 240 71.7
SGA_v2.0_scaffold10G05312 Striga asiatica HOM05D020090 ORTHO05D021022 1.4e-49 201.1 129 89.1
SGA_v2.0_scaffold211G42136 Striga asiatica HOM05D009828 ORTHO05D013311 1.7e-13 81.3 96 42.7
SGA_v2.0_scaffold15G07208 Striga asiatica HOM05D009828 ORTHO05D013311 6.3e-13 79.3 134 37.3
SGA_v2.0_scaffold36G14526 Striga asiatica HOM05D009828 ORTHO05D013311 1.2e-11 75.1 128 39.1
SGA_v2.0_scaffold31G12735 Striga asiatica HOM05D009828 ORTHO05D013311 1.6e-11 74.7 110 40.9
SGA_v2.0_scaffold268G46209 Striga asiatica HOM05D011541 ORTHO05D013911 2.0e-11 74.3 115 38.3
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-10 71.2 118 33.9
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-10 71.2 96 36.5
SGA_v2.0_scaffold10G05478 Striga asiatica HOM05D011541 ORTHO05D013911 1.7e-10 71.2 111 36.0
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-10 70.5 123 30.9
Rhsim09G0049900 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-10 70.5 106 37.7
SGA_v2.0_scaffold105G30320 Striga asiatica HOM05D011541 ORTHO05D013911 6.6e-10 69.3 109 34.9
SGA_v2.0_scaffold272G46343 Striga asiatica HOM05D009828 ORTHO05D013311 8.6e-10 68.9 99 39.4
SGA_v2.0_scaffold53G19404 Striga asiatica HOM05D011541 ORTHO05D013911 1.1e-09 68.6 113 33.6
Rhsim02G0197700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-09 67.8 96 36.5
SGA_v2.0_scaffold55G19890 Striga asiatica HOM05D009828 ORTHO05D013311 1.9e-09 67.8 108 40.7
Prupe.8G015400 Prunus persica HOM05D011213 ORTHO05D012867 2.5e-09 67.4 116 31.9
Sopen03g035430 Solanum pennellii HOM05D000017 ORTHO05D000013 9.5e-09 65.5 110 35.5
Sopen04g025960 Solanum pennellii HOM05D000017 ORTHO05D000013 9.5e-09 65.5 110 35.5
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-08 65.1 98 35.7
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-08 65.1 100 35.0
SGA_v2.0_scaffold41G15840 Striga asiatica HOM05D009828 ORTHO05D013311 6.1e-08 62.8 87 40.2
Rhsim10G0126100 Rhododendron simsii HOM05D000017 ORTHO05D004107 8.0e-08 62.4 90 33.3
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-07 61.6 98 30.6
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 2.3e-07 60.8 95 33.7
SGA_v2.0_scaffold333G49003 Striga asiatica HOM05D009828 ORTHO05D013311 2.3e-07 60.8 86 39.5
SGA_v2.0_scaffold4G02358 Striga asiatica HOM05D009828 ORTHO05D013311 2.3e-07 60.8 94 40.4
Atru.chr6.3055 Acer truncatum HOM05D000017 ORTHO05D000013 3.1e-07 60.5 103 33.0
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 4.0e-07 60.1 95 33.7
FvH4_6g39831 Fragaria vesca HOM05D000017 ORTHO05D000013 4.0e-07 60.1 95 33.7
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.0e-07 60.1 98 30.6
Cc11_g04540 Coffea canephora HOM05D000017 ORTHO05D013311 5.2e-07 59.7 116 28.4
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 8.9e-07 58.9 97 35.1
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.9e-07 58.9 95 33.7
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.9e-07 58.9 95 33.7
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 58.5 118 33.1
Medtr6g022470 Medicago truncatula HOM05D000017 ORTHO05D000013 1.5e-06 58.2 62 38.7
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-06 58.2 95 34.7
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 1.5e-06 58.2 59 44.1
Hma1.2p1_0327F.1_g126370 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 57.8 131 29.0
ECA236G5085 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.6e-06 57.4 101 32.7
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-06 57.4 116 30.2
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-06 57.4 116 30.2
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 2.6e-06 57.4 95 30.5
SGA_v2.0_scaffold29G12302 Striga asiatica HOM05D011744 ORTHO05D021022 2.6e-06 57.4 67 44.8
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 57.0 116 30.2
Dinv14599 Davidia involucrata HOM05D000017 ORTHO05D000013 4.4e-06 56.6 94 30.9
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 56.6 116 31.0
Medtr2g461790 Medicago truncatula HOM05D000017 ORTHO05D000013 4.4e-06 56.6 124 30.6
Sopen02g005760 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-06 56.2 110 32.7
Sopen08g018320 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-06 56.2 110 32.7
HanXRQChr17g0545141 Helianthus annuus HOM05D000017 ORTHO05D000013 7.5e-06 55.8 100 31.0
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.5e-06 55.8 117 30.8
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 9.8e-06 55.5 95 33.7
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.8e-06 55.5 95 32.6


User provided reference genes

Program Settings