Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 9.8e-77 290.0 145 100.0
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.7e-68 261.5 166 82.5
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 7.0e-67 257.3 147 91.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 3.4e-53 211.8 143 72.7
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 4.6e-50 201.4 146 69.9
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.5e-48 196.4 141 67.4
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.9e-48 196.1 141 68.1
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 2.4e-46 189.1 134 65.7
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.1e-46 188.7 115 76.5
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 6.9e-46 187.6 127 70.9
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.6e-45 185.7 115 73.9
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.6e-45 185.7 115 73.9
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 5.8e-45 184.5 130 70.0
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 7.6e-45 184.1 156 60.3
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 7.6e-45 184.1 118 72.9
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 2.2e-44 182.6 144 63.2
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 2.9e-44 182.2 122 73.8
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 3.8e-44 181.8 139 63.3
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.4e-43 179.9 124 69.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 3.2e-43 178.7 114 71.1
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 3.2e-43 178.7 140 59.3
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 3.2e-43 178.7 136 62.5
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 3.2e-43 178.7 139 61.2
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 3.2e-43 178.7 137 64.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.4e-43 177.9 133 66.2
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 5.4e-43 177.9 133 66.2
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 7.1e-43 177.6 145 60.7
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 7.1e-43 177.6 137 65.0
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.6e-42 176.4 141 62.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.6e-42 176.4 144 61.8
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.6e-42 176.4 137 64.2
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 1.6e-42 176.4 126 65.1
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 1.6e-42 176.4 118 68.6
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.1e-42 176.0 138 63.8
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.1e-42 176.0 138 63.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 3.5e-42 175.3 143 62.9
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 3.5e-42 175.3 146 58.9
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 3.5e-42 175.3 113 71.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 3.5e-42 175.3 139 60.4
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 7.8e-42 174.1 138 62.3
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.0e-41 173.7 138 61.6
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.0e-41 173.7 138 61.6
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.0e-41 173.7 147 61.2
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 1.3e-41 173.3 143 60.8
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.3e-41 173.3 115 69.6
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.7e-41 172.9 110 73.6
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 1.7e-41 172.9 146 56.2
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 1.7e-41 172.9 146 56.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.3e-41 172.6 115 70.4
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 2.3e-41 172.6 123 68.3
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.3e-41 172.6 123 68.3
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 3.9e-41 171.8 140 62.9
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 3.9e-41 171.8 135 61.5
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 3.9e-41 171.8 142 59.2
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 5.1e-41 171.4 148 60.1
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 8.7e-41 170.6 115 67.8
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.1e-40 170.2 142 59.9
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.1e-40 170.2 136 61.0
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.1e-40 170.2 104 74.0
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.1e-40 170.2 142 59.2
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 2.5e-40 169.1 118 66.9
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 2.5e-40 169.1 150 55.3
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 3.3e-40 168.7 140 61.4
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 3.3e-40 168.7 123 66.7
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 9.6e-40 167.2 135 61.5
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 2.1e-39 166.0 115 66.1
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 2.8e-39 165.6 145 60.0
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 3.6e-39 165.2 131 64.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 3.6e-39 165.2 114 65.8
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 4.8e-39 164.9 144 56.9
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 6.2e-39 164.5 167 50.3
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 8.1e-39 164.1 118 66.1
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 1.4e-38 163.3 131 63.4
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.8e-38 162.9 131 58.8
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.4e-38 162.5 138 63.0
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 2.4e-38 162.5 112 65.2
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 3.1e-38 162.2 112 67.9
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 4.0e-38 161.8 142 58.5
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 5.3e-38 161.4 136 57.4
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 1.5e-37 159.8 124 65.3
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 2.6e-37 159.1 136 58.1
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.6e-37 159.1 115 63.5
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 5.8e-37 157.9 158 50.6
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 9.9e-37 157.1 146 56.8
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.7e-36 156.4 148 56.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 3.8e-36 155.2 116 66.4
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.1e-35 153.7 113 65.5
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 6.0e-34 147.9 91 74.7
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 3.9e-33 145.2 90 73.3
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 6.2e-31 137.9 118 58.5
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 5.3e-30 134.8 101 62.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 9.0e-30 134.0 123 52.8
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 3.4e-29 132.1 117 54.7
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 7.6e-29 131.0 102 62.7
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.1e-27 127.1 133 53.4
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 4.2e-27 125.2 147 46.3
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.6e-26 123.2 124 54.0
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 2.1e-26 122.9 118 55.1
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 2.7e-26 122.5 115 55.7
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 7.9e-26 120.9 125 54.4
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 7.9e-26 120.9 114 54.4
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.5e-24 116.7 99 56.6
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.8e-23 112.5 72 70.8
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 2.6e-21 105.9 143 44.1
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 5.8e-21 104.8 96 53.1
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.4e-19 100.1 89 53.9
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.4e-19 100.1 63 77.8
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.9e-16 89.7 53 77.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.9e-16 89.7 70 62.9
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 5.7e-16 88.2 50 76.0
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 5.3e-14 81.6 48 75.0
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 5.9e-13 78.2 52 63.5
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.7e-12 76.6 94 46.8
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 1.0e-09 67.4 102 35.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 2.5e-08 62.8 45 51.1


User provided reference genes

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