Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 6.8e-232 807.0 415 100.0
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 4.8e-177 624.8 450 76.4
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 5.3e-168 594.7 475 70.7
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 7.7e-151 537.7 435 67.8
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.8e-144 516.5 474 62.4
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.2e-143 513.8 462 62.8
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.0e-138 496.5 459 62.1
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 4.4e-138 495.4 459 62.1
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 2.2e-137 493.0 459 61.9
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 3.7e-137 492.3 456 61.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 6.4e-137 491.5 463 61.6
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 4.1e-136 488.8 456 62.5
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 7.0e-136 488.0 459 60.8
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 3.0e-134 482.6 462 59.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 5.0e-134 481.9 458 61.6
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 8.6e-134 481.1 456 60.5
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.9e-133 479.9 397 67.0
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 7.3e-133 478.0 459 61.0
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 7.3e-133 478.0 465 60.4
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 2.1e-132 476.5 526 55.9
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 3.6e-132 475.7 444 61.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.7e-132 475.3 448 61.2
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 6.2e-132 474.9 458 59.4
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 8.9e-131 471.1 439 59.7
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 8.9e-131 471.1 457 58.6
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 2.0e-130 469.9 468 59.4
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.7e-129 466.8 449 59.7
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 8.3e-129 464.5 398 63.3
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.4e-128 463.8 463 59.4
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 3.2e-128 462.6 458 57.6
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 3.2e-128 462.6 466 56.9
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 1.7e-126 456.8 457 56.9
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 2.3e-126 456.4 449 57.9
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.3e-126 456.4 442 57.9
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 3.9e-126 455.7 452 58.2
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 1.5e-125 453.8 451 58.3
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.5e-125 453.8 457 56.5
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 5.6e-125 451.8 447 58.4
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.6e-124 450.3 458 56.3
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.1e-123 447.6 457 55.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.4e-123 447.2 446 58.7
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 4.0e-123 445.7 452 56.4
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 5.2e-123 445.3 450 57.8
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 6.8e-123 444.9 457 55.4
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 3.7e-121 439.1 472 57.6
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 8.3e-121 438.0 443 56.9
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 1.6e-119 433.7 452 55.3
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 2.5e-117 426.4 445 56.2
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 2.5e-117 426.4 460 54.6
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.2e-116 424.1 442 55.0
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 8.1e-116 421.4 384 59.4
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-115 420.2 463 53.6
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.0e-115 419.1 464 52.6
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 6.8e-115 418.3 462 54.8
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.2e-114 417.5 420 56.9
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.5e-114 417.2 463 52.3
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 4.4e-114 415.6 267 82.8
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 1.7e-113 413.7 373 62.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 2.9e-113 412.9 461 55.3
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.1e-112 411.0 352 63.1
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.9e-112 410.2 439 54.2
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 2.7e-111 406.4 452 54.4
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 1.3e-110 404.1 461 52.7
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 5.1e-110 402.1 331 64.0
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.5e-109 400.6 325 66.2
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 1.9e-109 400.2 455 53.4
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 2.8e-108 396.4 459 52.9
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 6.2e-108 395.2 462 51.7
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.8e-107 393.7 437 53.1
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.4e-106 389.4 331 64.4
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 5.8e-106 388.7 424 53.1
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.8e-105 386.0 344 58.7
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.1e-103 380.2 254 72.8
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 4.6e-103 379.0 449 52.1
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 8.7e-102 374.8 444 52.7
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.5e-101 374.0 439 52.4
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 6.2e-100 368.6 407 54.1
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 8.1e-100 368.2 357 58.0
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.4e-99 366.7 396 52.0
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 4.0e-99 365.9 461 50.3
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 6.9e-99 365.2 466 49.8
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 5.8e-98 362.1 343 56.6
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 2.9e-97 359.8 453 50.3
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 2.4e-96 356.7 454 50.9
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 2.4e-96 356.7 457 50.8
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.1e-96 355.1 361 54.8
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.6e-95 354.0 415 51.6
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 2.1e-95 353.6 452 51.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 2.1e-95 353.6 460 50.4
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.3e-94 350.9 461 49.9
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 6.0e-87 325.5 517 43.3
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.9e-85 320.5 379 49.1
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.4e-80 304.3 400 47.8
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 4.6e-79 299.3 328 52.4
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.2e-73 280.4 181 76.8
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 7.9e-71 271.9 434 41.2
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.3e-70 270.4 472 42.2
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.3e-68 264.6 474 39.5
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.0e-66 257.3 464 37.9
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 1.2e-63 248.1 424 41.5
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.4e-58 229.9 392 42.3
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 6.1e-55 219.2 348 39.9
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 6.3e-52 209.1 292 42.8
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 1.4e-46 191.4 180 58.3
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 8.2e-44 182.2 208 52.4
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.8e-31 140.6 180 42.8
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 2.9e-20 104.0 149 44.3
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.6e-18 98.2 178 41.0
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 5.2e-14 83.2 65 63.1
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 7.8e-10 69.3 43 76.7
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 5.6e-08 63.2 63 49.2


User provided reference genes

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