Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33930 Striga asiatica HOM05D024675 ORTHO05D020971 3.4e-200 701.4 348 100.0
SGA_v2.0_scaffold184G39920 Striga asiatica HOM05D024675 ORTHO05D020971 6.9e-44 182.2 95 86.3
SGA_v2.0_scaffold531G52752 Striga asiatica HOM05D024675 ORTHO05D020971 2.5e-41 173.7 156 60.9
SGA_v2.0_scaffold97G29233 Striga asiatica HOM05D024675 ORTHO05D020971 3.2e-25 120.2 174 43.7
Psat5g047320 Pisum sativum HOM05D030450 ORTHO05D020971 4.7e-16 89.7 121 47.9
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 4.7e-16 89.7 93 58.1
Cfa024744 Carpinus fangiana HOM05D016628 ORTHO05D018927 1.2e-11 75.1 121 41.3
Lj1A1088T17 Lonicera japonica HOM05D000423 ORTHO05D000284 3.2e-09 67.0 66 56.1
Eucgr.A02229 Eucalyptus grandis HOM05D000423 ORTHO05D000284 2.7e-08 63.9 81 48.1
HanXRQChr01g0008531 Helianthus annuus HOM05D000423 ORTHO05D000284 6.1e-08 62.8 48 68.8
DCAR_016884 Daucus carota HOM05D000423 ORTHO05D000284 8.0e-08 62.4 104 40.4
ClCG04G005690 Citrullus lanatus HOM05D000423 ORTHO05D000284 2.3e-07 60.8 50 60.0
MELO3C019102.2 Cucumis melo HOM05D000423 ORTHO05D000284 2.3e-07 60.8 50 60.0
CsaV3_4G029470 Cucumis sativus L. HOM05D000423 ORTHO05D000284 2.3e-07 60.8 50 60.0
Prupe.7G031400 Prunus persica HOM05D000423 ORTHO05D000284 2.3e-07 60.8 82 45.1
unitig_37.g12783 Utricularia gibba HOM05D000423 ORTHO05D000284 4.0e-07 60.1 48 66.7
CANSAT64G1523 Cannabis sativa HOM05D000423 ORTHO05D000284 8.8e-07 58.9 48 64.6
SGA_v2.0_scaffold66G22268 Striga asiatica HOM05D000423 ORTHO05D000284 8.8e-07 58.9 40 72.5
GSVIVG01025748001 Vitis vinifera HOM05D000423 ORTHO05D000284 8.8e-07 58.9 48 64.6
GSVIVG01025749001 Vitis vinifera HOM05D000423 ORTHO05D000284 8.8e-07 58.9 48 64.6
Medtr7g089360 Medicago truncatula HOM05D000423 ORTHO05D000284 1.2e-06 58.5 48 64.6
Glyma.03G126000 Glycine max HOM05D000423 ORTHO05D000284 2.0e-06 57.8 48 64.6
Phvul.001G121100 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 2.0e-06 57.8 48 64.6
VMungo1383G0850 Vigna mungo HOM05D000423 ORTHO05D000284 2.0e-06 57.8 48 64.6
Glyma.19G128800 Glycine max HOM05D000423 ORTHO05D000284 2.6e-06 57.4 48 62.5
ECA248G3444 Erigeron canadensis HOM05D000423 ORTHO05D000284 3.4e-06 57.0 48 58.3
Cpa.g.sc92.84 Carica papaya HOM05D000423 ORTHO05D000284 4.4e-06 56.6 48 64.6
Hund02325 Selenicereus undatus HOM05D000423 ORTHO05D000284 4.4e-06 56.6 75 46.7
Sed0023937 Sechium edule HOM05D000423 ORTHO05D000284 5.7e-06 56.2 54 48.1
Zm00001eb372180 Zea mays HOM05D000423 ORTHO05D000284 5.7e-06 56.2 70 50.0
AUR62014812 Chenopodium quinoa HOM05D000423 ORTHO05D000284 9.8e-06 55.5 48 60.4
AUR62017007 Chenopodium quinoa HOM05D000423 ORTHO05D000284 9.8e-06 55.5 48 60.4
PSO017G4574 Papaver somniferum HOM05D000423 ORTHO05D000284 9.8e-06 55.5 48 60.4
PSO478G0548 Papaver somniferum HOM05D000423 ORTHO05D000284 9.8e-06 55.5 48 60.4
Zm00001eb194640 Zea mays HOM05D000423 ORTHO05D000284 9.8e-06 55.5 74 40.5


User provided reference genes

Program Settings