Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 3.0e-227 791.6 418 100.0
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.0e-81 308.1 418 48.8
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.4e-67 261.2 401 43.6
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.7e-60 236.5 470 40.0
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 5.4e-59 232.6 459 40.1
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 2.7e-58 230.3 315 48.6
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 4.5e-58 229.6 442 41.0
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 2.9e-57 226.9 376 43.1
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 5.0e-57 226.1 436 39.2
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.5e-56 224.6 470 39.1
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 3.6e-55 219.9 380 41.8
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 3.0e-54 216.9 486 37.7
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 8.9e-54 215.3 473 38.9
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 2.0e-53 214.2 423 39.7
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.0e-53 214.2 488 36.9
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 2.6e-53 213.8 421 40.4
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 3.4e-53 213.4 449 38.8
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 7.5e-53 212.2 469 38.2
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-52 211.5 436 39.0
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.7e-52 211.1 432 37.7
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 2.8e-52 210.3 430 37.9
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 2.4e-51 207.2 434 38.9
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 3.1e-51 206.8 436 38.5
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 1.6e-50 204.5 401 39.2
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 2.7e-50 203.8 459 37.0
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.3e-49 201.4 452 37.2
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.7e-49 201.1 426 37.8
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 2.9e-49 200.3 408 40.4
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 5.6e-48 196.1 448 37.9
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.1e-47 194.1 436 39.7
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.3e-46 190.7 416 37.3
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 4.0e-46 189.9 421 36.8
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 4.0e-46 189.9 431 37.1
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 6.8e-46 189.1 396 37.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 2.2e-44 184.1 438 37.0
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 2.9e-44 183.7 485 34.8
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 2.9e-44 183.7 427 35.1
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.9e-44 183.7 432 37.5
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 3.7e-44 183.3 439 37.4
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 4.9e-44 183.0 434 37.3
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 6.4e-44 182.6 434 36.9
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.4e-43 179.5 393 39.7
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 9.2e-43 178.7 420 36.9
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-42 177.6 426 36.9
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 3.0e-41 173.7 445 34.4
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 5.0e-41 172.9 431 36.7
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 6.6e-41 172.6 428 34.6
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.2e-39 168.3 276 41.7
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.4e-38 164.9 257 45.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.4e-38 164.9 435 34.7
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 6.8e-38 162.5 264 42.4
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 2.6e-37 160.6 403 34.2
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 2.2e-36 157.5 387 36.7
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 2.2e-36 157.5 385 37.9
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-36 157.1 262 42.7
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 3.7e-36 156.8 292 38.7
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-35 154.8 408 34.3
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-35 154.5 383 36.0
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 7.8e-34 149.1 439 31.9
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-33 148.3 417 33.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.7e-33 147.9 450 33.8
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 2.3e-33 147.5 430 33.0
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-32 145.2 393 34.1
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 5.6e-32 142.9 417 33.1
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.2e-31 141.7 419 35.6
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.6e-31 141.4 419 34.4
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.1e-31 141.0 418 33.5
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.6e-31 140.2 456 33.1
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.1e-30 138.7 260 40.8
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-30 138.3 412 33.7
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 5.2e-30 136.3 430 34.2
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.2e-29 135.2 299 39.5
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-29 134.0 403 32.5
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-29 134.0 398 33.7
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 4.4e-29 133.3 415 33.7
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 9.9e-29 132.1 377 34.7
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 2.2e-28 131.0 420 31.9
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.4e-27 128.3 420 33.8
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 3.2e-27 127.1 227 38.8
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 7.1e-27 125.9 293 35.5
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 2.7e-26 124.0 424 33.5
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 2.3e-25 120.9 535 28.2
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 8.6e-25 119.0 303 34.0
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.5e-24 118.2 414 31.9
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 7.3e-24 115.9 432 32.6
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 1.6e-23 114.8 424 32.3
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.1e-22 112.1 223 39.0
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-21 108.2 230 35.7
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-21 107.5 278 34.5
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 4.4e-21 106.7 279 35.5
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.5e-16 90.9 342 31.9
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 9.6e-16 89.0 79 58.2
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.6e-13 80.9 74 47.3
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.3e-09 68.6 221 30.3
PGR044G0919 Punica granatum HOM05D005497 ORTHO05D006733 3.0e-09 67.4 229 28.4
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 6.6e-09 66.2 273 28.6
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 1.5e-08 65.1 262 24.4
Nn8g39876 Nelumbo nucifera HOM05D005497 ORTHO05D006733 3.6e-07 60.5 234 26.9
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 4.8e-07 60.1 234 26.5
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 4.8e-07 60.1 100 43.0
SMO367G0340 Selaginella moellendorffii HOM05D018912 ORTHO05D004121 1.1e-06 58.9 257 24.1
EL10Ac2g04114 Beta vulgaris HOM05D005497 ORTHO05D006733 1.8e-06 58.2 273 26.7
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 1.8e-06 58.2 239 27.2
Psat5g032840 Pisum sativum HOM05D005497 ORTHO05D006733 2.4e-06 57.8 224 27.2
Potri.018G019400 Populus trichocarpa HOM05D005497 ORTHO05D006733 2.4e-06 57.8 256 26.2
Actinidia22292 Actinidia chinensis HOM05D005497 ORTHO05D006733 3.1e-06 57.4 245 26.1
TWI32G0158 Tripterygium wilfordii HOM05D005497 ORTHO05D006733 6.9e-06 56.2 355 27.3
Actinidia10518 Actinidia chinensis HOM05D005497 ORTHO05D006733 9.0e-06 55.8 231 25.1
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 9.0e-06 55.8 118 34.7
Pp3c4_1590 Physcomitrium patens HOM05D018912 ORTHO05D021275 9.0e-06 55.8 240 27.5


User provided reference genes

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