Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 0.0e+00 1275.4 775 100.0
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.9e-227 793.1 833 66.1
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 7.3e-211 738.0 824 63.8
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 9.2e-206 721.1 859 55.8
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 4.9e-183 645.6 827 59.6
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 9.6e-171 604.7 785 58.7
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.3e-170 604.4 854 54.9
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.2e-168 597.8 849 54.9
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 5.8e-168 595.5 853 54.0
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 1.3e-167 594.3 854 55.3
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 1.7e-167 594.0 853 54.0
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 4.2e-166 589.3 858 55.1
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.2e-162 575.1 856 48.8
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 1.8e-161 573.9 790 57.0
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 7.6e-160 568.5 815 55.0
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 2.9e-159 566.6 856 54.7
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 3.8e-159 566.2 729 59.0
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.1e-158 564.7 828 55.0
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.1e-158 564.7 852 54.3
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 9.3e-158 561.6 814 54.7
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 1.6e-157 560.8 816 54.2
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 4.6e-157 559.3 756 55.8
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 4.6e-157 559.3 812 55.4
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 7.9e-157 558.5 787 56.2
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.3e-156 557.8 830 54.5
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 1.5e-152 544.3 852 52.7
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 2.2e-151 540.4 830 53.7
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 2.2e-151 540.4 844 51.9
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 3.8e-151 539.7 783 55.0
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 8.5e-151 538.5 808 53.6
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 1.9e-150 537.3 843 52.2
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 9.4e-150 535.0 841 52.7
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 2.3e-148 530.4 824 54.2
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 2.3e-148 530.4 761 54.5
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 1.3e-146 524.6 819 52.9
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 2.8e-146 523.5 800 54.5
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 2.4e-145 520.4 781 49.3
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 8.5e-143 511.9 859 51.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.1e-142 511.5 802 48.4
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 1.4e-142 511.1 828 51.3
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 1.4e-142 511.1 828 51.3
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.4e-142 511.1 858 50.8
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 3.2e-142 510.0 857 51.5
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 3.2e-142 510.0 857 51.5
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 7.2e-142 508.8 782 52.9
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.2e-141 508.1 703 57.0
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 1.2e-141 508.1 862 45.5
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 2.1e-141 507.3 808 52.0
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 1.4e-140 504.6 784 52.2
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 6.7e-140 502.3 782 52.6
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 4.4e-139 499.6 698 57.2
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 1.1e-137 495.0 839 48.9
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.8e-137 494.2 857 49.7
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 3.1e-137 493.4 864 48.4
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 5.3e-137 492.7 856 50.0
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 1.2e-136 491.5 788 51.0
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 2.0e-136 490.7 854 50.0
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 2.6e-136 490.3 828 52.1
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 3.5e-136 490.0 852 49.8
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.9e-135 486.9 824 51.8
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 7.2e-134 482.3 836 50.4
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 9.4e-134 481.9 816 50.1
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 1.4e-132 478.0 844 50.4
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 3.9e-132 476.5 836 49.5
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 5.2e-132 476.1 872 43.0
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 5.7e-131 472.6 800 50.5
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 5.7e-131 472.6 842 49.0
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.3e-130 471.5 778 44.2
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.1e-129 468.4 778 44.0
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 1.1e-129 468.4 814 50.2
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 4.1e-129 466.5 739 50.7
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 1.6e-128 464.5 818 50.0
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 1.0e-127 461.8 784 45.5
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 2.2e-127 460.7 822 44.6
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 1.5e-126 458.0 787 51.2
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 2.7e-125 453.8 743 50.7
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 4.7e-125 453.0 839 48.3
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 8.0e-125 452.2 808 49.4
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 4.0e-124 449.9 792 50.5
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 3.4e-123 446.8 815 50.3
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 2.2e-122 444.1 792 50.0
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 1.3e-119 434.9 830 48.9
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 9.4e-118 428.7 830 40.7
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 9.1e-113 412.1 795 47.8
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 7.7e-112 409.1 754 41.0
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 2.3e-103 380.9 797 39.4
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 1.9e-102 377.9 580 58.6
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 2.2e-90 337.8 805 42.7
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 2.4e-89 334.3 352 65.9
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 1.3e-82 312.0 516 56.8
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 3.2e-81 307.4 544 47.4
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 4.0e-68 263.8 784 41.2
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 9.0e-68 262.7 634 30.9
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 1.3e-66 258.8 273 69.2
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 6.4e-66 256.5 518 52.9
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.2e-56 225.7 798 37.7
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 5.6e-54 216.9 278 41.7
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 5.6e-54 216.9 219 55.3
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 2.0e-51 208.4 826 37.4
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 5.3e-44 183.7 224 49.1
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 7.2e-41 173.3 175 50.9
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 1.0e-39 169.5 310 50.0
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 1.4e-33 149.1 484 33.9
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 5.7e-22 110.5 135 48.1
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 7.4e-22 110.2 169 41.4
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 1.4e-12 79.3 74 58.1
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 9.1e-12 76.6 58 58.6
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 4.2e-09 67.8 171 53.8
TWI79G1119 Tripterygium wilfordii HOM05D005362 ORTHO05D000355 1.6e-08 65.9 150 27.3
TWI38G0410 Tripterygium wilfordii HOM05D002453 ORTHO05D008746 1.2e-06 59.7 135 26.7


User provided reference genes

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