Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 6.8e-227 790.4 424 100.0
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 5.6e-80 302.4 221 72.9
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 4.7e-79 299.3 236 72.5
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 2.0e-69 267.3 210 71.4
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 9.9e-69 265.0 258 62.4
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 1.1e-67 261.5 223 62.8
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 1.6e-66 257.7 242 62.0
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.8e-62 244.2 214 64.0
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 4.0e-62 243.0 216 68.1
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 2.0e-61 240.7 223 61.9
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 7.6e-61 238.8 215 61.9
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 4.9e-60 236.1 219 58.9
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 4.9e-60 236.1 216 67.6
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 8.4e-60 235.3 214 61.2
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.2e-58 231.5 214 65.4
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 7.8e-58 228.8 215 62.8
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 7.8e-58 228.8 216 63.0
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 7.8e-58 228.8 216 63.0
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 1.7e-57 227.6 228 64.5
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 1.7e-57 227.6 215 64.7
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 2.3e-57 227.3 218 61.5
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 2.3e-57 227.3 212 60.8
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 3.9e-57 226.5 213 62.9
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 5.1e-57 226.1 231 58.9
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 1.1e-56 224.9 213 62.0
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 9.6e-56 221.9 214 61.2
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 3.6e-55 219.9 216 54.2
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.1e-54 218.4 210 57.1
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.1e-54 218.4 211 60.7
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.4e-54 218.0 217 61.8
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 1.8e-54 217.6 222 64.0
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 3.1e-54 216.9 206 61.7
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 3.1e-54 216.9 225 59.6
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 4.0e-54 216.5 218 60.6
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 4.0e-54 216.5 218 60.6
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 6.9e-54 215.7 220 57.7
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 6.9e-54 215.7 214 63.1
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 9.0e-54 215.3 210 61.4
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 1.5e-53 214.5 220 59.5
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.5e-53 213.0 216 60.6
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 4.5e-53 213.0 216 60.6
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 5.8e-53 212.6 220 62.3
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 5.8e-53 212.6 193 65.8
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 5.8e-53 212.6 232 57.3
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.3e-52 211.5 216 60.6
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 1.3e-52 211.5 226 60.6
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 1.7e-52 211.1 215 56.3
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.9e-52 210.3 218 59.6
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 3.8e-52 209.9 226 60.6
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 3.8e-52 209.9 213 62.0
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 6.4e-52 209.1 221 56.1
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 1.1e-51 208.4 220 61.4
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 4.2e-51 206.5 235 55.3
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 5.4e-51 206.1 218 58.7
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 7.1e-51 205.7 167 66.5
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 9.3e-51 205.3 222 60.4
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 1.2e-50 204.9 209 57.9
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.6e-50 204.5 218 57.3
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 2.7e-50 203.8 210 59.5
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.6e-50 203.0 222 55.4
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 7.9e-50 202.2 168 66.7
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 7.9e-50 202.2 215 54.0
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.3e-49 201.4 203 57.6
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.3e-49 201.4 212 59.9
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.8e-49 201.1 222 54.5
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 1.8e-49 201.1 216 58.3
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 2.3e-49 200.7 216 56.9
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 3.0e-49 200.3 214 59.8
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 3.9e-49 199.9 209 61.2
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 3.9e-49 199.9 203 57.1
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 5.1e-49 199.5 213 61.0
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 6.7e-49 199.1 223 54.7
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 1.1e-48 198.4 204 61.8
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.5e-48 198.0 213 54.5
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 1.5e-48 198.0 222 56.3
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 2.5e-48 197.2 222 50.9
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 2.5e-48 197.2 218 55.0
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 3.3e-48 196.8 195 60.0
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 4.3e-48 196.4 213 51.6
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 5.6e-48 196.1 218 52.3
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 7.4e-48 195.7 218 51.4
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 9.6e-48 195.3 191 62.3
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 1.3e-47 194.9 217 51.2
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 1.3e-47 194.9 216 53.2
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.3e-47 194.9 210 52.4
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 1.6e-47 194.5 215 52.1
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 2.8e-47 193.7 216 51.9
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 3.7e-47 193.4 217 51.6
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 3.7e-47 193.4 210 53.3
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 3.7e-47 193.4 146 69.2
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 6.2e-47 192.6 212 51.4
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 8.1e-47 192.2 211 53.6
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 8.1e-47 192.2 248 48.0
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 8.1e-47 192.2 211 54.0
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.1e-46 191.8 212 59.0
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 1.8e-46 191.0 213 52.6
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 2.4e-46 190.7 214 52.3
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 2.4e-46 190.7 215 53.0
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 4.0e-46 189.9 201 59.2
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 5.3e-46 189.5 238 47.1
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 6.9e-46 189.1 204 52.0
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 6.9e-46 189.1 151 63.6
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-44 184.5 214 50.9
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 3.8e-44 183.3 212 50.9
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 1.1e-43 181.8 210 54.8
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 7.1e-43 179.1 219 47.0
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 1.6e-42 177.9 215 49.3
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 2.1e-42 177.6 208 52.9
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 2.7e-42 177.2 212 49.1
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 2.7e-42 177.2 172 56.4
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 3.0e-41 173.7 199 50.8
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 1.9e-40 171.0 139 65.5
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 2.5e-40 170.6 207 49.8
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 2.1e-39 167.5 203 50.2
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 4.8e-39 166.4 207 49.8
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 2.4e-38 164.1 230 50.4
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 3.8e-36 156.8 187 56.7
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 8.4e-36 155.6 201 51.2
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 1.0e-33 148.7 222 44.6
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 1.5e-32 144.8 142 54.9
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 1.5e-32 144.8 227 43.2
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 4.3e-32 143.3 210 47.1
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.6e-31 141.4 191 44.5
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 2.8e-31 140.6 221 42.1
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 6.3e-31 139.4 136 58.1
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 1.4e-30 138.3 111 72.1
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 9.0e-30 135.6 217 41.5
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 1.2e-29 135.2 120 60.8
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 1.5e-29 134.8 220 38.2
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 1.7e-28 131.3 209 40.2
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 2.9e-28 130.6 172 40.1
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.1e-27 128.6 202 40.1
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.4e-27 128.3 97 61.9
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 1.0e-25 122.1 113 46.9
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 8.8e-25 119.0 205 40.0
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 9.7e-24 115.5 116 49.1
SGA_v2.0_scaffold75G24925 Striga asiatica HOM05D012811 ORTHO05D014461 1.3e-23 115.2 98 66.3
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 2.2e-23 114.4 217 37.8
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 4.8e-23 113.2 97 61.9
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 1.8e-22 111.3 96 51.0
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 2.4e-22 110.9 78 56.4
SGA_v2.0_scaffold71G24026 Striga asiatica HOM05D012811 ORTHO05D014461 2.4e-22 110.9 123 61.0
FAN21G0556 Fragaria x ananassa HOM05D000792 ORTHO05D014461 1.2e-21 108.6 169 44.4
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 1.2e-21 108.6 95 49.5
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 3.4e-21 107.1 121 55.4
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 2.9e-20 104.0 121 54.5
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 6.5e-20 102.8 201 38.3
FAN11G0838 Fragaria x ananassa HOM05D012811 ORTHO05D014461 6.5e-20 102.8 100 57.0
CiPaw.14G071700 Carya illinoinensis HOM05D012811 ORTHO05D014461 8.5e-20 102.4 163 45.4
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 4.2e-19 100.1 109 45.9
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 4.2e-19 100.1 157 36.9
Carub.0006s0137 Capsella rubella HOM05D012811 ORTHO05D014461 1.6e-18 98.2 116 54.3
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 2.7e-18 97.4 131 40.5
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 3.6e-18 97.1 176 35.8
SGA_v2.0_scaffold277G46699 Striga asiatica HOM05D012811 ORTHO05D014461 1.0e-17 95.5 151 51.0
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.8e-17 94.7 86 48.8
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 2.3e-17 94.4 224 32.1
Carub.0001s0715 Capsella rubella HOM05D012811 ORTHO05D014461 5.1e-17 93.2 130 50.8
arahy.Tifrunner.gnm1.ann1.078QS1 Arachis hypogaea HOM05D012811 ORTHO05D014461 4.4e-16 90.1 88 54.5
arahy.Tifrunner.gnm1.ann1.IRJ5UX Arachis hypogaea HOM05D012811 ORTHO05D014461 5.7e-16 89.7 88 53.4
Carub.0003s0858 Capsella rubella HOM05D012811 ORTHO05D014461 3.7e-15 87.0 108 49.1
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 1.2e-13 82.0 109 42.2
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 1.5e-13 81.6 118 48.3
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 2.0e-13 81.3 116 51.7
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 1.0e-12 79.0 204 33.8
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 1.8e-09 68.2 117 37.6
SHI40291 Sapria himalayana HOM05D012811 ORTHO05D014461 9.7e-08 62.4 77 44.2
Oeu041536.1 Olea europaea HOM05D004429 ORTHO05D288779 6.3e-07 59.7 117 35.0
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 1.4e-06 58.5 76 43.4
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 1.8e-06 58.2 76 43.4


User provided reference genes

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