Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 3.9e-165 584.7 297 100.0
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 3.9e-96 355.5 309 65.7
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 6.0e-73 278.5 298 53.7
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 1.6e-57 227.3 302 51.0
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 1.1e-53 214.5 202 57.9
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 1.4e-50 204.1 298 45.3
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 3.9e-48 196.1 303 44.9
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 8.8e-48 194.9 265 46.4
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 6.3e-38 162.2 216 45.4
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 8.3e-38 161.8 304 44.1
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 9.1e-37 158.3 316 41.5
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 4.5e-36 156.0 290 41.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.1e-34 151.4 265 43.8
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.9e-34 150.6 263 43.3
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.2e-34 149.8 288 39.6
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 9.4e-34 148.3 288 39.2
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 3.6e-33 146.4 305 39.3
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 1.0e-32 144.8 275 41.1
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.3e-32 143.7 276 42.8
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 4.0e-32 142.9 148 58.8
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.2e-31 141.4 217 46.1
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.0e-31 140.6 302 36.8
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 4.8e-30 136.0 219 44.3
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 6.3e-30 135.6 294 38.8
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.1e-29 134.8 283 41.3
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.4e-29 134.4 271 40.6
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 4.5e-28 129.4 291 38.8
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 5.9e-28 129.0 316 36.4
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 1.3e-27 127.9 277 39.4
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 6.6e-27 125.6 285 37.5
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 8.6e-27 125.2 300 35.7
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 1.5e-26 124.4 142 55.6
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.5e-26 124.4 233 42.1
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 1.9e-26 124.0 281 39.9
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 2.5e-26 123.6 278 38.8
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.3e-26 123.2 276 38.0
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 1.2e-25 121.3 249 39.8
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 4.7e-25 119.4 223 39.5
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 6.1e-25 119.0 218 44.5
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 8.0e-25 118.6 315 37.8
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 8.0e-25 118.6 316 36.4
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 8.0e-25 118.6 316 36.7
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 8.0e-25 118.6 217 44.2
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 5.2e-24 115.9 314 36.6
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.5e-23 114.4 304 35.2
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.5e-23 114.4 279 38.7
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 7.5e-23 112.1 298 35.6
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 9.8e-23 111.7 272 37.9
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 2.2e-22 110.5 214 41.6
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.8e-22 110.2 273 35.9
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.1e-21 108.2 219 40.2
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 1.1e-21 108.2 224 37.1
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.4e-21 107.8 275 36.7
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.4e-21 107.1 209 38.3
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 5.4e-21 105.9 227 36.6
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 7.0e-21 105.5 273 35.2
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 7.0e-21 105.5 168 42.9
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.6e-20 104.4 247 37.7
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.6e-20 104.4 292 33.9
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 1.6e-20 104.4 265 35.8
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.8e-20 102.1 160 43.8
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 7.8e-20 102.1 209 38.8
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.0e-19 101.7 231 38.1
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 1.7e-19 100.9 275 34.9
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 2.3e-19 100.5 278 36.0
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 2.9e-19 100.1 268 32.8
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 3.9e-19 99.8 205 42.0
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 3.9e-19 99.8 239 36.0
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 5.0e-19 99.4 203 37.4
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.1e-18 98.2 282 34.4
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 3.3e-18 96.7 227 37.4
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 4.3e-18 96.3 159 40.9
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 7.3e-18 95.5 205 37.1
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 7.3e-18 95.5 211 38.9
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 9.5e-18 95.1 206 38.8
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 9.5e-18 95.1 152 42.1
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 9.5e-18 95.1 268 34.3
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 1.2e-17 94.7 208 37.0
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 1.6e-17 94.4 148 43.9
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.6e-17 94.4 290 34.8
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.1e-17 94.0 301 34.6
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 2.8e-17 93.6 270 34.8
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.8e-17 93.6 144 43.8
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.8e-17 93.6 225 36.9
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 8.0e-17 92.0 283 34.3
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.0e-16 91.7 298 33.6
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 2.3e-16 90.5 203 36.0
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 4.0e-16 89.7 275 34.2
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 5.2e-16 89.4 230 33.5
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 5.2e-16 89.4 280 34.3
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 5.2e-16 89.4 231 34.2
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.5e-15 87.8 139 41.7
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 3.4e-15 86.7 302 31.5
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 4.4e-15 86.3 277 32.9
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 5.8e-15 85.9 159 40.9
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 9.8e-15 85.1 162 37.0
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 9.8e-15 85.1 278 31.3
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 9.8e-15 85.1 209 38.8
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 1.3e-14 84.7 155 42.6
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.7e-14 84.3 302 32.1
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 2.2e-14 84.0 271 34.3
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.7e-14 83.2 226 33.2
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 3.7e-14 83.2 216 35.2
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 4.9e-14 82.8 267 31.5
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 4.9e-14 82.8 224 35.3
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 8.3e-14 82.0 122 46.7
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 1.1e-13 81.6 231 35.1
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 1.4e-13 81.3 205 35.1
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 1.9e-13 80.9 263 32.3
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 1.9e-13 80.9 224 33.9
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.4e-13 80.5 144 43.8
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 2.4e-13 80.5 285 31.9
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 3.2e-13 80.1 282 31.6
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 5.4e-13 79.3 232 33.2
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 5.4e-13 79.3 80 56.2
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 9.2e-13 78.6 131 42.0
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 9.2e-13 78.6 260 30.4
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 9.2e-13 78.6 147 41.5
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 1.6e-12 77.8 266 32.3
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-12 77.8 232 32.8
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.5e-12 76.6 169 38.5
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 7.8e-12 75.5 260 31.2
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 5.0e-11 72.8 228 32.9
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 8.6e-11 72.0 148 41.2
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 8.6e-11 72.0 237 34.2
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 8.6e-11 72.0 206 35.9
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.1e-10 71.6 109 48.6
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 1.5e-10 71.2 199 32.7
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 1.9e-10 70.9 145 38.6
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 9.5e-10 68.6 157 37.6
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 1.6e-09 67.8 131 41.2
PSO339G1969 Papaver somniferum HOM05D004206 ORTHO05D003325 2.1e-09 67.4 102 47.1
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 2.8e-09 67.0 66 54.5
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.6e-09 66.6 47 66.0
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 3.6e-09 66.6 174 36.2
HPP92_000797 Vanilla planifolia HOM05D004206 ORTHO05D003325 3.6e-09 66.6 128 38.3
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 8.0e-09 65.5 171 35.7
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 1.1e-08 65.1 218 31.2
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 1.4e-08 64.7 135 43.0
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.8e-08 64.3 270 31.5
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 2.3e-08 63.9 66 51.5
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.3e-08 63.9 143 38.5
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 3.1e-08 63.5 69 53.6
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 4.0e-08 63.2 205 32.7
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 5.2e-08 62.8 73 49.3
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 1.5e-07 61.2 55 58.2
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 2.0e-07 60.8 74 52.7
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 2.6e-07 60.5 257 28.8
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 3.4e-07 60.1 150 36.0
MBI14_g07165_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 5.8e-07 59.3 224 31.7
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 7.5e-07 58.9 94 48.9
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 7.5e-07 58.9 202 32.7
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 9.8e-07 58.5 83 49.4
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 9.8e-07 58.5 66 48.5
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.7e-06 57.8 49 61.2
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 1.7e-06 57.8 100 45.0
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.2e-06 57.4 93 44.1
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 2.9e-06 57.0 80 46.2
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 3.7e-06 56.6 53 54.7
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 3.7e-06 56.6 53 54.7
Migut.M01027 Erythranthe guttata HOM05D004206 ORTHO05D003325 4.9e-06 56.2 96 40.6
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 4.9e-06 56.2 230 32.2
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 4.9e-06 56.2 252 31.3
Nn2g12918 Nelumbo nucifera HOM05D004206 ORTHO05D003325 6.4e-06 55.8 138 35.5
BcaC07g39726 Brassica carinata HOM05D008508 ORTHO05D003325 8.3e-06 55.5 51 54.9
A09p46660 Brassica napus HOM05D008508 ORTHO05D003325 8.3e-06 55.5 51 54.9
C08p28980 Brassica napus HOM05D008508 ORTHO05D003325 8.3e-06 55.5 51 54.9
BolC8t50501H Brassica oleracea HOM05D008508 ORTHO05D003325 8.3e-06 55.5 51 54.9
BraA07t29860Z Brassica rapa HOM05D008508 ORTHO05D003325 8.3e-06 55.5 97 39.2


User provided reference genes

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