Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 1.3e-134 483.0 244 100.0
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 9.4e-56 221.1 218 56.0
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 6.3e-52 208.4 227 49.3
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 7.0e-51 204.9 273 44.7
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 3.6e-39 166.0 236 41.1
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 8.6e-33 144.8 248 37.5
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 1.4e-30 137.5 221 41.2
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 1.3e-28 131.0 241 36.5
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 1.1e-27 127.9 229 38.0
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 8.6e-25 118.2 99 59.6
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 2.1e-23 113.6 185 41.1
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 5.6e-16 89.0 119 42.9
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 1.4e-14 84.3 106 41.5
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 1.8e-14 84.0 152 38.2
FAN20G2603 Fragaria x ananassa HOM05D009108 ORTHO05D011557 5.4e-11 72.4 88 37.5
Nitab4.5_0002700g0230 Nicotiana tabacum HOM05D009108 ORTHO05D011557 1.6e-10 70.9 68 52.9
Solyc06g005450.1 Solanum lycopersicum HOM05D009108 ORTHO05D011557 6.6e-09 65.5 73 41.1
SHI06947 Sapria himalayana HOM05D009108 ORTHO05D011557 3.3e-08 63.2 80 40.0
Os03g0821150 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 2.1e-07 60.5 57 56.1
EL10Ac1g01322 Beta vulgaris HOM05D009108 ORTHO05D011557 1.4e-06 57.8 81 35.8
Cc01_g01990 Coffea canephora HOM05D009108 ORTHO05D011557 1.4e-06 57.8 70 51.4
SGA_v2.0_scaffold47G17727 Striga asiatica HOM05D009108 ORTHO05D011557 6.8e-06 55.5 95 44.2


User provided reference genes

Program Settings