Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.9e-156 555.8 281 100.0
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 3.0e-106 389.0 291 70.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 5.7e-105 384.8 292 69.2
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 7.0e-87 324.7 303 62.4
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 6.5e-85 318.2 300 61.7
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.5e-84 316.2 308 57.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 9.4e-84 314.3 303 60.7
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 9.4e-84 314.3 303 59.7
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.2e-83 313.9 304 61.5
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.1e-83 313.2 302 59.6
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.0e-82 310.8 307 58.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.2e-81 307.4 301 57.8
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.0e-81 306.6 295 61.0
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.4e-81 305.4 300 57.3
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 9.7e-81 304.3 278 61.9
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.7e-80 303.5 271 59.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 2.2e-80 303.1 290 57.2
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 4.8e-80 302.0 290 60.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 5.3e-79 298.5 304 57.6
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 7.0e-79 298.1 291 57.0
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 7.0e-79 298.1 307 57.3
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 9.1e-79 297.7 298 56.0
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.1e-79 297.7 284 60.6
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.6e-78 297.0 284 59.9
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.5e-78 295.8 285 58.9
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.5e-78 295.4 298 56.7
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.0e-77 294.3 307 54.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.3e-77 293.9 300 58.3
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 3.8e-77 292.4 289 57.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 3.8e-77 292.4 298 56.4
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 3.8e-77 292.4 297 56.6
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.1e-76 290.8 295 54.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.5e-76 290.4 301 56.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.2e-76 289.3 302 57.9
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 3.2e-76 289.3 291 56.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 5.5e-76 288.5 282 57.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.5e-76 288.5 300 59.3
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 7.2e-76 288.1 310 54.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.1e-75 286.6 303 56.8
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.7e-75 286.2 288 57.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 4.7e-75 285.4 303 54.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 8.0e-75 284.6 299 54.8
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.4e-74 283.9 289 56.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.8e-74 283.5 293 55.6
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 3.0e-74 282.7 334 49.7
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 5.2e-74 282.0 281 58.0
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.5e-73 280.4 284 54.9
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.6e-73 279.6 283 56.5
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 3.4e-73 279.3 296 57.8
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 7.5e-73 278.1 303 56.1
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 7.5e-73 278.1 330 49.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 7.5e-73 278.1 263 58.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.7e-72 276.9 306 52.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 2.2e-72 276.6 303 55.8
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 6.3e-72 275.0 286 56.6
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.1e-71 274.2 315 52.4
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.4e-71 273.9 285 55.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.4e-71 273.9 287 54.4
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.8e-71 273.5 301 52.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.1e-71 272.7 285 56.1
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 7.0e-71 271.6 303 51.8
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.2e-70 270.8 289 54.3
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.2e-70 270.8 289 54.3
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.6e-70 270.4 296 53.7
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.6e-70 270.4 304 52.3
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.0e-70 270.0 290 54.8
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.9e-70 268.5 296 53.7
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 5.9e-70 268.5 293 55.6
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 7.7e-70 268.1 293 53.2
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.0e-69 267.7 275 57.1
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.3e-69 267.3 250 61.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.7e-69 266.9 296 53.4
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.0e-69 265.4 295 54.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 6.5e-69 265.0 286 54.5
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.0e-66 256.1 296 51.7
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 3.0e-66 256.1 339 48.7
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.5e-65 253.8 295 52.9
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.4e-65 252.7 292 51.4
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.3e-64 250.8 286 53.5
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.3e-64 250.8 275 53.1
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.7e-64 250.4 343 47.8
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.2e-63 244.6 278 52.5
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.3e-61 240.7 158 75.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.9e-61 239.6 267 52.8
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.1e-60 237.7 171 70.8
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.9e-60 236.9 317 48.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.5e-60 236.5 232 58.6
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 6.0e-54 215.3 287 48.1
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.1e-52 211.1 257 47.5
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.1e-51 206.8 109 83.5
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 5.2e-50 202.2 109 84.4
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.0e-49 200.3 109 83.5
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 4.4e-49 199.1 297 47.8
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 8.6e-45 184.9 120 70.0
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 5.6e-44 182.2 98 82.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.2e-43 181.0 98 87.8
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.4e-42 177.6 95 84.2
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.1e-42 176.4 276 42.4
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 4.0e-42 176.0 98 81.6
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.9e-40 169.9 244 45.9
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 4.6e-38 162.5 124 61.3
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 8.1e-35 151.8 98 71.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.1e-34 151.4 98 73.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.5e-33 147.5 81 81.5
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 3.2e-31 139.8 207 44.0
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.5e-25 120.9 218 39.0
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.2e-23 112.8 182 48.4
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.0e-21 106.7 197 41.1
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.9e-21 106.3 203 41.9
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.4e-15 87.0 192 38.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.4e-15 87.0 42 97.6
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 6.7e-13 79.0 41 85.4
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 2.8e-11 73.6 69 50.7
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 8.1e-11 72.0 95 43.2
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 8.1e-11 72.0 95 43.2
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.1e-10 71.6 95 43.2
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.0e-09 67.4 44 65.9
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.5e-09 66.2 186 32.3
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.2e-07 59.7 177 34.5
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.5e-07 59.3 187 31.0
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 7.1e-07 58.9 106 38.7


User provided reference genes

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