Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 3.2e-69 265.0 138 100.0
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 5.0e-30 134.8 138 54.3
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 7.2e-29 131.0 142 54.9
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 5.2e-27 124.8 139 57.6
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 3.7e-25 118.6 147 51.7
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 4.9e-25 118.2 136 55.1
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 5.9e-23 111.3 140 48.6
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.9e-22 109.0 138 48.6
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 3.9e-22 108.6 139 48.2
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.0e-22 108.2 146 47.9
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 8.6e-22 107.5 146 46.6
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 8.6e-22 107.5 127 49.6
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 4.3e-21 105.1 139 49.6
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 7.3e-21 104.4 135 51.9
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 7.3e-21 104.4 124 49.2
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.5e-21 104.0 139 47.5
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.2e-20 103.6 134 50.0
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 3.6e-20 102.1 127 47.2
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.6e-20 102.1 140 47.9
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 3.6e-20 102.1 140 50.0
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 8.0e-20 100.9 98 55.1
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.3e-19 99.4 137 47.4
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 2.3e-19 99.4 125 51.2
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 4.0e-19 98.6 97 55.7
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.2e-19 98.2 137 48.2
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.0e-18 96.3 135 45.2
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 7.5e-18 94.4 95 53.7
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 9.8e-18 94.0 130 47.7
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 9.8e-18 94.0 131 49.6
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 9.8e-18 94.0 135 42.2
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 9.8e-18 94.0 144 44.4
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.3e-17 93.6 113 49.6
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 2.2e-17 92.8 60 75.0
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 2.9e-17 92.4 100 55.0
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 3.7e-17 92.0 136 41.2
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.7e-17 92.0 136 41.2
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.9e-17 91.7 136 41.2
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 4.9e-17 91.7 127 45.7
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 4.9e-17 91.7 97 51.5
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 4.9e-17 91.7 97 51.5
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 6.4e-17 91.3 134 46.3
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.1e-16 90.5 142 43.7
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.1e-16 90.5 137 43.8
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.4e-16 90.1 126 45.2
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.4e-16 90.1 136 41.2
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.9e-16 89.7 129 48.8
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 1.9e-16 89.7 144 42.4
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.4e-16 89.4 124 44.4
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 2.4e-16 89.4 144 42.4
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 5.4e-16 88.2 99 54.5
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 7.0e-16 87.8 69 63.8
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.6e-15 86.7 138 45.7
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.0e-15 86.3 134 44.0
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.5e-15 85.5 97 48.5
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 7.8e-15 84.3 139 41.7
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.7e-14 83.2 95 49.5
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.7e-14 83.2 137 41.6
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.0e-14 82.4 144 42.4
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 6.6e-14 81.3 141 41.1
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.1e-13 80.5 98 50.0
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.6e-12 76.6 137 40.1
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 1.6e-12 76.6 142 40.8
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 3.6e-12 75.5 133 42.9
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 4.7e-12 75.1 141 40.4
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.1e-12 74.3 129 41.9
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.1e-12 74.3 135 39.3
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 8.1e-12 74.3 135 39.3
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 1.1e-11 73.9 141 38.3
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-11 73.9 138 39.9
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.2e-11 71.6 135 35.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 5.2e-11 71.6 106 47.2
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 5.2e-11 71.6 135 37.0
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-10 70.5 93 46.2
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.2e-10 70.5 101 39.6
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 1.5e-10 70.1 134 39.6
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.0e-10 69.7 130 40.8
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 7.5e-10 67.8 133 38.3
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 9.8e-10 67.4 139 36.7
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 9.8e-10 67.4 134 35.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 9.8e-10 67.4 130 41.5
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.3e-09 67.0 137 37.2
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 1.7e-09 66.6 136 34.6
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 2.2e-09 66.2 129 39.5
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.7e-09 65.5 125 40.8
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 3.7e-09 65.5 131 38.2
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 6.4e-09 64.7 116 39.7
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 8.3e-09 64.3 116 39.7
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.1e-08 63.9 120 38.3
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-08 63.9 138 38.4
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.9e-08 63.2 131 40.5
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.4e-08 62.8 95 41.1
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 3.2e-08 62.4 129 38.0
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 4.1e-08 62.0 131 34.4
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.2e-07 60.5 93 46.2
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 1.6e-07 60.1 52 63.5
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.6e-07 60.1 134 37.3
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 1.6e-07 60.1 112 38.4
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.1e-07 59.7 132 36.4
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 6.0e-07 58.2 129 36.4
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 7.8e-07 57.8 115 37.4
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 1.3e-06 57.0 116 37.9
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 2.3e-06 56.2 120 39.2
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 3.0e-06 55.8 55 56.4
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 5.1e-06 55.1 134 36.6
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 8.6e-06 54.3 108 37.0
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 8.6e-06 54.3 95 42.1


User provided reference genes

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