Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33782 Striga asiatica HOM05D022532 ORTHO05D023449 3.1e-212 741.5 364 100.0
SGA_v2.0_scaffold75G24951 Striga asiatica HOM05D022532 ORTHO05D023449 3.2e-52 209.9 171 70.8
Os03g0822033 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 5.8e-17 92.8 99 53.5
Os02g0744150 Oryza sativa ssp. japonica HOM05D022532 ORTHO05D023449 2.4e-15 87.4 89 59.6
Os01g0823150 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 2.7e-14 84.0 104 49.0
Hma1.2p1_0936F.1_g238740 Hydrangea macrophylla HOM05D047238 ORTHO05D048315 7.8e-14 82.4 69 58.0
Hma1.2p1_3138F.1_g333046 Hydrangea macrophylla HOM05D047238 ORTHO05D048315 7.8e-14 82.4 69 58.0
Os10g0439166 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 7.3e-12 75.9 145 36.6
unitig_747.g21396 Utricularia gibba HOM05D009743 ORTHO05D012107 7.3e-12 75.9 103 41.7
ATR0796G307 Amborella trichopoda HOM05D022532 ORTHO05D023449 4.0e-10 70.1 74 54.1
Os01g0249050 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 4.0e-10 70.1 92 46.7
Solyc10g084790.1 Solanum lycopersicum HOM05D022532 ORTHO05D023449 2.0e-09 67.8 103 44.7
SGA_v2.0_scaffold110G31327 Striga asiatica HOM05D009743 ORTHO05D012107 4.9e-08 63.2 87 40.2
Os02g0267350 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 4.1e-07 60.1 100 40.0
Zm00001eb004280 Zea mays HOM05D009743 ORTHO05D012107 4.1e-07 60.1 96 42.7
Os05g0277100 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 7.1e-07 59.3 157 32.5
unitig_747.g22034 Utricularia gibba HOM05D009743 ORTHO05D012107 1.2e-06 58.5 56 53.6
SGA_v2.0_scaffold286G47129 Striga asiatica HOM05D009743 ORTHO05D404246 2.7e-06 57.4 125 32.8


User provided reference genes

Program Settings