Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 2.7e-88 328.6 159 100.0
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.6e-43 179.9 160 59.4
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.5e-41 173.3 142 62.0
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.9e-41 172.9 159 60.4
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.2e-38 163.7 154 55.8
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 2.0e-38 162.9 161 55.9
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.4e-38 162.2 96 76.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.9e-37 159.1 145 57.2
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 3.7e-37 158.7 133 58.6
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.3e-37 157.5 84 82.1
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 8.3e-37 157.5 118 64.4
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.1e-36 157.1 157 54.1
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.9e-36 156.4 128 61.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.2e-36 155.6 106 67.9
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 5.4e-36 154.8 84 82.1
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 7.1e-36 154.5 118 62.7
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 7.1e-36 154.5 131 61.8
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.2e-35 153.7 119 63.0
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.6e-35 153.3 126 61.9
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.6e-35 153.3 99 67.7
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 3.5e-35 152.1 162 52.5
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 3.5e-35 152.1 107 67.3
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 3.5e-35 152.1 109 66.1
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 6.0e-35 151.4 120 65.0
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 7.8e-35 151.0 83 80.7
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.0e-34 150.6 127 59.8
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.0e-34 150.6 99 72.7
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.0e-34 150.6 136 55.9
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.0e-34 150.6 140 56.4
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.0e-34 150.6 157 51.6
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.7e-34 149.8 116 61.2
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.7e-34 149.8 140 56.4
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.7e-34 149.8 141 55.3
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.7e-34 149.8 121 63.6
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 3.0e-34 149.1 104 65.4
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.0e-34 149.1 86 81.4
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.0e-34 149.1 140 55.7
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 5.1e-34 148.3 103 68.0
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 5.1e-34 148.3 145 54.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 5.1e-34 148.3 78 85.9
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 8.6e-34 147.5 112 64.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 8.6e-34 147.5 106 64.2
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 8.6e-34 147.5 121 60.3
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.1e-33 147.1 100 69.0
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.1e-33 147.1 106 65.1
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 1.1e-33 147.1 108 66.7
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.1e-33 147.1 149 51.7
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.5e-33 146.7 93 74.2
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.5e-33 146.7 99 70.7
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.5e-33 146.7 99 70.7
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.9e-33 146.4 109 63.3
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 2.5e-33 146.0 138 54.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 2.5e-33 146.0 138 54.3
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.5e-33 146.0 140 55.0
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 5.6e-33 144.8 95 68.4
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 5.6e-33 144.8 146 50.7
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 7.3e-33 144.4 101 64.4
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 7.3e-33 144.4 93 72.0
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 9.5e-33 144.1 106 67.0
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.2e-32 143.7 93 71.0
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.2e-32 143.7 101 66.3
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.2e-32 143.7 97 70.1
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.2e-32 143.7 95 66.3
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.6e-32 143.3 142 53.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.6e-32 142.1 80 77.5
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 3.6e-32 142.1 93 69.9
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.6e-32 142.1 97 72.2
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 4.7e-32 141.7 85 74.1
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 6.2e-32 141.4 71 84.5
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.2e-32 141.4 71 83.1
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 6.8e-31 137.9 134 56.7
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.2e-30 137.1 71 81.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 1.5e-30 136.7 106 62.3
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.5e-30 136.7 149 50.3
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 2.0e-30 136.3 104 59.6
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 4.4e-30 135.2 80 71.2
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 5.8e-30 134.8 88 67.0
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 5.8e-30 134.8 97 63.9
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 5.8e-30 134.8 87 67.8
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 8.4e-29 131.0 140 52.1
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.4e-28 130.2 98 63.3
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 1.9e-28 129.8 149 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 4.1e-28 128.6 80 70.0
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.0e-26 124.0 92 63.0
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 3.9e-26 122.1 74 78.4
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 4.3e-25 118.6 67 79.1
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 4.3e-25 118.6 78 69.2
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 5.6e-25 118.2 104 61.5
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 9.6e-25 117.5 64 78.1
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.6e-24 116.7 64 78.1
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 3.6e-24 115.5 115 53.9
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.1e-23 114.0 70 75.7
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 8.9e-23 110.9 86 60.5
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 9.9e-22 107.5 65 73.8
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.7e-21 106.7 73 67.1
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 4.9e-21 105.1 72 59.7
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 6.4e-21 104.8 168 41.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.3e-16 90.5 63 58.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.1e-16 89.7 69 63.8
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 1.4e-15 87.0 99 49.5
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 6.9e-07 58.2 37 67.6


User provided reference genes

Program Settings