Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.7e-238 828.9 427 100.0
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 3.9e-174 615.1 433 75.3
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 1.1e-165 587.0 433 73.0
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 5.5e-160 568.2 431 68.9
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 2.5e-128 463.0 335 72.5
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 2.8e-127 459.5 400 60.2
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 7.5e-125 451.4 400 59.2
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 3.1e-123 446.0 403 57.8
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 4.1e-123 445.7 386 60.6
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.2e-117 427.6 394 56.3
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 1.3e-116 424.1 389 58.1
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 6.4e-116 421.8 437 53.5
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 6.0e-114 415.2 435 52.9
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 3.9e-113 412.5 422 53.1
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 1.5e-112 410.6 436 53.0
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 2.5e-112 409.8 397 53.9
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 9.5e-112 407.9 433 52.2
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 4.7e-111 405.6 396 54.5
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.4e-110 404.1 397 52.9
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 3.1e-110 402.9 384 56.2
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 4.0e-110 402.5 402 55.5
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 4.0e-110 402.5 399 54.1
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.5e-109 400.6 435 52.6
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 7.5e-109 398.3 431 51.3
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 3.7e-108 396.0 435 51.0
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 5.4e-107 392.1 431 50.8
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 4.6e-106 389.0 388 54.6
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 6.0e-106 388.7 439 51.7
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 3.0e-105 386.3 427 50.6
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 1.1e-104 384.4 384 53.1
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.9e-104 383.6 431 50.3
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 3.3e-104 382.9 405 51.6
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 9.5e-104 381.3 434 48.6
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 2.8e-103 379.8 432 50.0
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 6.2e-103 378.6 411 51.3
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 1.4e-102 377.5 435 50.3
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 2.3e-102 376.7 437 49.9
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 5.2e-102 375.6 384 51.8
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 2.0e-101 373.6 508 45.5
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 5.4e-99 365.5 410 49.0
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 9.2e-99 364.8 422 48.1
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 2.1e-98 363.6 414 48.6
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 6.0e-98 362.1 404 51.0
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 3.0e-97 359.8 420 47.9
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 3.9e-97 359.4 298 61.7
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.5e-96 357.5 433 47.1
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 9.5e-96 354.8 422 47.4
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 8.1e-95 351.7 306 61.1
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.5e-93 347.4 420 48.1
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 3.4e-93 346.3 313 58.8
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.9e-92 343.2 395 48.4
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 1.4e-91 340.9 429 46.2
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 3.2e-91 339.7 334 54.8
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 7.1e-91 338.6 392 50.5
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 3.5e-90 336.3 392 49.0
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 7.8e-90 335.1 371 50.9
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 7.8e-90 335.1 421 47.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 1.7e-89 334.0 391 48.3
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 2.3e-89 333.6 331 54.4
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 8.7e-89 331.6 388 48.5
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 8.7e-89 331.6 428 46.5
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.1e-88 331.3 389 47.8
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 2.5e-88 330.1 438 46.3
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 3.3e-88 329.7 389 47.3
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 9.6e-88 328.2 388 46.4
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 9.6e-88 328.2 390 48.2
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 2.8e-87 326.6 433 44.8
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 2.8e-87 326.6 321 54.8
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 3.6e-87 326.2 306 56.9
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 5.3e-86 322.4 402 45.5
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 9.0e-86 321.6 395 46.3
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 4.4e-85 319.3 388 46.6
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 2.2e-84 317.0 413 43.8
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 2.9e-84 316.6 389 46.3
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 3.8e-84 316.2 389 46.5
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 9.3e-83 311.6 435 44.6
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.5e-80 303.5 422 43.6
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 8.1e-79 298.5 432 42.8
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 1.1e-78 298.1 434 44.0
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 5.3e-78 295.8 392 44.4
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 6.9e-78 295.4 438 44.1
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 5.1e-73 279.3 438 41.3
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.1e-72 278.1 440 40.7
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.1e-70 271.6 216 60.2
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 4.0e-70 269.6 438 39.3
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 1.2e-69 268.1 328 46.0
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.2e-69 268.1 345 44.6
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 3.4e-69 266.5 429 41.3
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 4.5e-69 266.2 393 41.5
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 6.0e-66 255.8 395 40.3
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 5.7e-64 249.2 394 39.6
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 1.3e-63 248.1 542 34.7
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 6.2e-63 245.7 386 40.4
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 4.0e-62 243.0 348 41.7
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 5.3e-62 242.7 200 59.0
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 9.0e-62 241.9 253 51.0
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 1.2e-58 231.5 354 40.7
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 1.8e-49 201.1 434 32.7
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 4.3e-48 196.4 290 41.7
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 5.3e-38 162.9 271 38.0
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.0e-36 158.7 370 32.2
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.9e-36 157.1 357 33.1
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.8e-36 156.8 115 67.8
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.7e-34 150.6 358 32.7
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 1.0e-33 148.7 388 31.7
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 1.6e-29 134.8 443 28.2
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 3.5e-29 133.7 230 39.1
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 3.0e-25 120.6 428 29.0
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 1.1e-22 112.1 171 41.5
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 3.1e-22 110.5 94 56.4
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.6e-21 108.2 91 60.4
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 1.1e-19 102.1 201 38.3
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 4.5e-13 80.1 150 36.0
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 3.8e-12 77.0 118 43.2
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 9.5e-11 72.4 60 58.3
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 8.0e-10 69.3 97 41.2
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 1.4e-09 68.6 95 42.1
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 4.1e-06 57.0 77 45.5


User provided reference genes

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