Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33760 Striga asiatica HOM05D000231 ORTHO05D000132 1.7e-99 365.9 177 100.0
SGA_v2.0_scaffold75G24964 Striga asiatica HOM05D000231 ORTHO05D000132 3.1e-24 115.9 296 31.1
Nitab4.5_0003394g0040 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.1e-16 90.9 269 27.1
Nitab4.5_0000705g0040 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.4e-16 90.5 271 26.9
Migut.J00305 Erythranthe guttata HOM05D000231 ORTHO05D000132 1.1e-13 80.9 84 48.8
Oeu010103.1 Olea europaea HOM05D000231 ORTHO05D000397 1.1e-13 80.9 86 47.7
Oeu006891.1 Olea europaea HOM05D000231 ORTHO05D000132 1.4e-13 80.5 177 31.1
Hma1.2p1_0936F.1_g239000 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 1.5e-10 70.5 84 42.9
Solyc09g010997.1 Solanum lycopersicum HOM05D000231 ORTHO05D000132 9.7e-10 67.8 100 38.0
Lj3C965T1 Lonicera japonica HOM05D000231 ORTHO05D000132 4.1e-08 62.4 84 41.7
TAR623G0433 Trochodendron aralioides HOM05D000231 ORTHO05D000132 4.1e-08 62.4 81 42.0
Rhsim04G0159000 Rhododendron simsii HOM05D000231 ORTHO05D000132 5.3e-08 62.0 92 40.2
Cc06_g02330 Coffea canephora HOM05D000231 ORTHO05D000132 6.9e-08 61.6 95 38.9
QL07p030901 Quercus lobata HOM05D000231 ORTHO05D000132 1.5e-07 60.5 85 38.8
Gohir.D04G122600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.0e-07 60.1 91 39.6
Gorai.012G105500 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.0e-07 60.1 91 39.6
Aqoxy1G00877 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 2.6e-07 59.7 90 37.8
QL07p030111 Quercus lobata HOM05D000231 ORTHO05D000132 2.6e-07 59.7 85 40.0
Manes.09G092137 Manihot esculenta HOM05D000231 ORTHO05D000132 3.4e-07 59.3 90 38.9
Actinidia05325 Actinidia chinensis HOM05D000231 ORTHO05D000132 4.5e-07 58.9 53 50.9
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 1.0e-06 57.8 87 34.5
CiPaw.09G195800 Carya illinoinensis HOM05D000231 ORTHO05D000132 1.0e-06 57.8 90 36.7
Rhsim04G0160700 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.0e-06 57.8 86 40.7
COL.COLO4_14758 Corchorus olitorius HOM05D000231 ORTHO05D000132 1.3e-06 57.4 99 36.4
Thecc.05G035500 Theobroma cacao HOM05D000231 ORTHO05D000132 1.3e-06 57.4 86 43.0
TAR633G0107 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.3e-06 57.4 87 32.2
Duzib106G1367 Durio zibethinus HOM05D000231 ORTHO05D000132 1.7e-06 57.0 86 40.7
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 1.7e-06 57.0 86 38.4
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 2.2e-06 56.6 91 35.2
Sabra06G0067300 Salix brachista HOM05D000231 ORTHO05D000132 2.9e-06 56.2 89 38.2
TWI77G0617 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.9e-06 56.2 83 37.3
Ciclev10012085m.g Citrus clementina HOM05D000231 ORTHO05D000132 3.8e-06 55.8 93 37.6
Gohir.A04G083800 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.5e-06 55.1 143 30.1
Potri.006G088300 Populus trichocarpa HOM05D000231 ORTHO05D000132 6.5e-06 55.1 91 39.6


User provided reference genes

Program Settings