Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 1.7e-266 922.2 478 100.0
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 3.4e-57 226.9 517 36.8
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 5.8e-33 146.4 385 35.3
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 4.9e-32 143.3 368 35.3
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 4.6e-30 136.7 335 36.4
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.6e-27 128.3 346 33.2
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 1.8e-26 124.8 361 31.9
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 7.6e-25 119.4 331 34.1
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.3e-24 118.6 330 31.8
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.7e-24 118.2 341 33.1
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 2.2e-24 117.9 361 31.3
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 4.9e-24 116.7 322 30.1
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 6.4e-24 116.3 330 31.5
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 6.4e-24 116.3 322 31.7
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 1.4e-23 115.2 374 31.6
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 7.1e-23 112.8 482 27.4
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 1.6e-22 111.7 387 28.9
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 2.7e-22 110.9 393 28.5
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.0e-21 109.0 328 32.0
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.3e-21 107.8 327 33.0
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 5.1e-21 106.7 357 31.4
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 1.1e-20 105.5 334 31.1
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 1.1e-20 105.5 316 31.3
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.9e-20 104.8 361 34.1
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 2.5e-20 104.4 346 30.6
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 2.5e-20 104.4 369 29.0
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 1.2e-19 102.1 370 28.4
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 1.2e-19 102.1 332 29.2
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 2.1e-19 101.3 327 28.1
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 2.8e-19 100.9 329 30.1
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 2.8e-19 100.9 324 29.3
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 4.7e-19 100.1 328 29.6
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 4.7e-19 100.1 362 28.7
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 8.1e-19 99.4 315 29.8
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 1.4e-18 98.6 326 29.8
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 1.4e-18 98.6 352 27.3
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 1.8e-18 98.2 326 30.4
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 2.4e-18 97.8 330 29.1
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.4e-18 97.8 333 30.9
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 3.1e-18 97.4 329 31.0
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 5.2e-18 96.7 355 30.4
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 6.9e-18 96.3 317 29.7
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 8.9e-18 95.9 362 29.3
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 3.4e-17 94.0 335 30.1
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 5.8e-17 93.2 324 26.9
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 1.3e-16 92.0 304 28.9
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 1.3e-16 92.0 207 33.8
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 2.2e-16 91.3 330 29.7
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 3.8e-16 90.5 357 28.9
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 3.8e-16 90.5 325 29.5
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 1.4e-15 88.6 345 27.5
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.4e-15 88.6 324 29.3
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 1.4e-15 88.6 333 30.0
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 4.2e-15 87.0 338 28.1
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 4.2e-15 87.0 331 26.3
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 5.4e-15 86.7 320 28.8
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 5.4e-15 86.7 336 29.5
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 7.1e-15 86.3 327 30.0
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 1.6e-14 85.1 340 27.9
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 2.1e-14 84.7 344 26.7
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 2.7e-14 84.3 329 28.0
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.7e-14 84.3 211 33.6
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 4.6e-14 83.6 353 30.0
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 6.0e-14 83.2 309 29.4
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 6.0e-14 83.2 309 29.4
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 6.0e-14 83.2 309 29.4
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 7.8e-14 82.8 318 29.6
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 1.0e-13 82.4 332 28.9
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 1.3e-13 82.0 319 27.9
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 3.0e-13 80.9 306 27.5
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 3.0e-13 80.9 484 24.8
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 3.0e-13 80.9 422 25.6
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 6.6e-13 79.7 325 28.6
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 8.7e-13 79.3 298 31.5
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.1e-12 79.0 280 31.4
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 1.9e-12 78.2 315 27.9
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 1.9e-12 78.2 323 31.6
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.9e-12 78.2 324 27.8
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 2.5e-12 77.8 311 30.5
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 2.5e-12 77.8 309 29.1
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.5e-12 77.8 312 27.2
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 2.5e-12 77.8 309 29.1
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 3.3e-12 77.4 279 29.0
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 3.3e-12 77.4 279 29.0
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 5.6e-12 76.6 308 29.2
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 5.6e-12 76.6 305 27.5
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 5.6e-12 76.6 226 30.5
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 5.6e-12 76.6 400 27.0
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 5.6e-12 76.6 324 28.7
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 9.6e-12 75.9 495 24.8
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 9.6e-12 75.9 248 31.0
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 3.6e-11 73.9 332 28.3
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 4.8e-11 73.6 301 26.2
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 4.8e-11 73.6 214 30.4
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 6.2e-11 73.2 302 26.5
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 6.2e-11 73.2 374 25.1
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 8.1e-11 72.8 339 28.9
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 1.1e-10 72.4 322 26.1
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.4e-10 72.0 303 26.1
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 2.4e-10 71.2 339 28.3
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 2.4e-10 71.2 303 25.7
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 4.0e-10 70.5 235 30.6
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 5.3e-10 70.1 472 23.3
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 5.3e-10 70.1 211 28.9
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 9.0e-10 69.3 312 26.6
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 9.0e-10 69.3 209 31.1
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 4.5e-09 67.0 203 28.1
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 7.6e-09 66.2 216 29.6
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 2.2e-08 64.7 313 25.6
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 6.4e-08 63.2 208 30.3
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 1.4e-07 62.0 301 26.9
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 3.2e-07 60.8 159 30.8
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 7.1e-07 59.7 166 30.1
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 7.1e-07 59.7 83 38.6
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 9.3e-07 59.3 307 25.7
Os01g0687300 Oryza sativa ssp. japonica HOM05D024721 ORTHO05D025980 1.6e-06 58.5 350 24.0
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 6.0e-06 56.6 322 27.6
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 7.9e-06 56.2 355 23.1


User provided reference genes

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