Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold125G33665 Striga asiatica HOM05D000218 ORTHO05D000125 3.4e-218 761.5 428 100.0
SGA_v2.0_scaffold534G52759 Striga asiatica HOM05D000218 ORTHO05D000125 1.7e-36 157.9 127 68.5
HanXRQChr01g0025971 Helianthus annuus HOM05D000218 ORTHO05D000125 1.3e-07 62.0 63 49.2
Nn5g27883 Nelumbo nucifera HOM05D000972 ORTHO05D007713 6.4e-07 59.7 71 49.3
AT5G37640 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 8.3e-07 59.3 63 52.4
AL7G44880 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.9e-06 58.2 63 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2460 Anthoceros agrestis HOM05D000218 ORTHO05D000125 2.4e-06 57.8 63 52.4
CDE01G0681 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.4e-06 57.8 68 51.5
Cc02_g31540 Coffea canephora HOM05D000218 ORTHO05D000125 3.2e-06 57.4 103 39.8
Nn6g33973 Nelumbo nucifera HOM05D000218 ORTHO05D000125 3.2e-06 57.4 91 42.9
Pp3c18_2470 Physcomitrium patens HOM05D000218 ORTHO05D000125 3.2e-06 57.4 69 49.3
Pp3c18_2510 Physcomitrium patens HOM05D000218 ORTHO05D000125 3.2e-06 57.4 69 49.3
TPR.G27484 Trifolium pratense HOM05D000218 ORTHO05D000125 3.2e-06 57.4 84 41.7
TWI59G0680 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 3.2e-06 57.4 91 41.8
Carub.0005s0851 Capsella rubella HOM05D000218 ORTHO05D000125 4.1e-06 57.0 75 48.0
CDE01G0073 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 4.1e-06 57.0 83 43.4
Gohir.A09G140600 Gossypium hirsutum HOM05D000218 ORTHO05D000125 4.1e-06 57.0 71 47.9
Gohir.D13G145700 Gossypium hirsutum HOM05D000218 ORTHO05D000125 4.1e-06 57.0 73 46.6
HanXRQChr15g0473451 Helianthus annuus HOM05D000218 ORTHO05D000125 4.1e-06 57.0 119 37.8
MCO07G714 Micromonas commoda HOM05D000218 ORTHO05D000125 4.1e-06 57.0 91 42.9
Atru.chr2.3221 Acer truncatum HOM05D000218 ORTHO05D000125 5.4e-06 56.6 78 42.3
Actinidia05262 Actinidia chinensis HOM05D000218 ORTHO05D000125 5.4e-06 56.6 63 52.4
Nn3g19713 Nelumbo nucifera HOM05D000218 ORTHO05D000125 5.4e-06 56.6 99 41.4
Nn1g00532 Nelumbo nucifera HOM05D000218 ORTHO05D000125 7.0e-06 56.2 103 38.8
THA.LOC104822973 Tarenaya hassleriana HOM05D000218 ORTHO05D000125 7.0e-06 56.2 91 41.8
AT1G23410 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 9.2e-06 55.8 91 41.8
CAN.G1311.3 Capsicum annuum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 52.4
CARHR084240 Cardamine hirsuta HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 52.4
CARHR124610 Cardamine hirsuta HOM05D000218 ORTHO05D000125 9.2e-06 55.8 91 42.9
CiPaw.09G016200 Carya illinoinensis HOM05D000218 ORTHO05D000125 9.2e-06 55.8 79 45.6
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 70 48.6
CDE04G1141 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 70 48.6
Cre01.g007051 Chlamydomonas reinhardtii HOM05D000218 ORTHO05D000125 9.2e-06 55.8 71 46.5
ECA248G0753 Erigeron canadensis HOM05D000218 ORTHO05D000125 9.2e-06 55.8 69 49.3
HanXRQChr01g0025881 Helianthus annuus HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 49.2
Nn1g01020 Nelumbo nucifera HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 50.8
Os06g0681400 Oryza sativa ssp. japonica HOM05D000218 ORTHO05D000125 9.2e-06 55.8 89 42.7
PSO137G0001 Papaver somniferum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 52.4
PSO573G0013 Papaver somniferum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 50.8
RcHm_v2.0_Chr3g0474431 Rosa chinensis HOM05D000218 ORTHO05D000125 9.2e-06 55.8 106 37.7
SEGI_30490 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 9.2e-06 55.8 63 52.4


User provided reference genes

Program Settings