Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 0.0e+00 2003.0 1012 100.0
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 2.3e-249 866.3 1074 49.7
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 6.3e-146 522.7 1103 36.7
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 2.6e-131 474.2 1009 36.7
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 4.4e-131 473.4 1066 36.1
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 1.0e-124 452.2 1065 36.0
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.8e-124 451.4 996 35.3
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 8.8e-124 449.1 1111 33.7
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 1.3e-122 445.3 1057 34.3
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.1e-121 442.2 989 35.8
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 5.0e-119 433.3 1081 33.7
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 5.9e-112 409.8 954 35.2
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 6.6e-111 406.4 1150 32.0
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.5e-110 405.2 1093 34.0
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 1.5e-110 405.2 1087 32.9
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 4.4e-107 393.7 1122 31.4
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 3.7e-106 390.6 1086 30.7
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.3e-103 382.1 1088 31.2
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 6.6e-103 379.8 300 66.7
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 2.8e-101 374.4 1096 29.7
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 8.9e-100 369.4 1083 30.9
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 2.0e-99 368.2 1094 30.3
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 2.0e-99 368.2 825 34.8
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 2.2e-98 364.8 1085 30.0
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 8.3e-98 362.8 1083 30.4
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 3.2e-97 360.9 1110 29.1
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 4.1e-97 360.5 1104 29.3
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 5.4e-97 360.1 1137 30.3
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 9.2e-97 359.4 1053 31.7
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 4.7e-93 347.1 1152 29.7
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.8e-92 345.1 1127 30.3
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 3.1e-92 344.4 1029 30.9
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.7e-90 338.6 1197 30.3
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 2.2e-90 338.2 1062 31.4
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 4.9e-90 337.0 1120 30.0
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 6.4e-90 336.7 1060 29.8
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 2.1e-88 331.6 999 30.2
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 3.5e-88 330.9 1111 30.4
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 2.5e-86 324.7 899 32.3
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 1.6e-85 322.0 840 33.0
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 4.7e-85 320.5 1129 30.9
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 8.1e-85 319.7 1128 28.8
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.4e-84 318.9 1146 29.1
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 1.8e-84 318.5 1099 29.8
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.8e-84 318.5 1130 29.1
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 4.0e-84 317.4 1068 30.0
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.2e-83 315.8 896 32.8
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 4.4e-83 313.9 1271 26.6
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 8.3e-82 309.7 1047 30.9
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 3.2e-81 307.8 901 29.2
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 5.4e-81 307.0 975 28.8
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.0e-79 302.8 896 31.2
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 3.9e-79 300.8 1020 29.9
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 6.6e-79 300.1 562 37.7
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.9e-78 298.5 1097 28.2
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 6.2e-77 293.5 1089 28.7
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.8e-76 292.0 973 30.3
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 4.0e-76 290.8 1024 29.4
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 2.6e-75 288.1 1038 28.3
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 6.6e-71 273.5 1088 28.1
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 4.0e-68 264.2 1139 25.8
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 1.7e-63 248.8 844 29.5
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 2.5e-62 245.0 401 38.2
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 6.9e-60 236.9 437 33.9
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.7e-58 232.3 1187 26.3
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.9e-57 228.8 958 28.4
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 4.2e-57 227.6 1096 26.7
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.6e-56 225.7 380 38.4
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 8.7e-55 219.9 821 28.6
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 3.3e-54 218.0 796 29.4
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 4.3e-54 217.6 994 27.8
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.6e-53 215.7 1012 27.3
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 4.3e-46 191.0 962 26.3
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 9.6e-46 189.9 1058 25.0
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 1.6e-45 189.1 244 41.0
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.4e-36 159.5 177 45.2
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 3.4e-35 154.8 838 26.0
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 2.2e-34 152.1 793 27.5
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 8.2e-29 133.7 516 28.1
Migut.B01184 Erythranthe guttata HOM05D007594 ORTHO05D009607 3.1e-28 131.7 167 49.1
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 5.3e-28 131.0 132 45.5
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 2.9e-26 125.2 818 25.6
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.0e-23 115.2 537 26.4
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 1.5e-22 112.8 146 41.8
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.2e-19 103.2 444 27.7
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 4.2e-17 94.7 121 43.0
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 3.1e-12 78.6 90 46.7
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 2.5e-09 68.9 103 33.0
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 3.2e-09 68.6 59 59.3
SEGI_25891 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 4.2e-09 68.2 436 25.0
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 2.1e-08 65.9 52 55.8
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 2.1e-08 65.9 76 34.2
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 2.3e-07 62.4 62 48.4
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 3.4e-06 58.5 109 39.4


User provided reference genes

Program Settings