Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 1.2e-177 626.3 306 100.0
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 8.8e-43 178.3 330 39.7
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 6.1e-28 129.0 287 35.5
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 1.7e-25 120.9 352 31.2
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 2.7e-20 103.6 313 31.0
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 2.4e-16 90.5 357 27.7
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 7.0e-16 89.0 363 27.8
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.0e-15 87.4 333 29.7
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 6.6e-14 82.4 153 37.9
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 6.6e-14 82.4 319 29.2
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 8.6e-14 82.0 316 28.2
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 4.2e-13 79.7 119 42.0
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 9.5e-13 78.6 219 32.4
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 1.4e-11 74.7 150 38.0
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.8e-11 74.3 312 28.5
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 2.3e-11 73.9 116 44.0
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 2.3e-11 73.9 113 46.0
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 5.2e-11 72.8 365 27.7
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 6.8e-11 72.4 111 41.4
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.2e-10 71.6 223 28.3
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 2.0e-10 70.9 118 38.1
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 2.6e-10 70.5 295 26.1
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 2.6e-10 70.5 96 41.7
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 2.6e-10 70.5 287 28.6
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 3.4e-10 70.1 165 32.1
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 4.4e-10 69.7 139 35.3
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 7.5e-10 68.9 284 30.3
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 7.5e-10 68.9 93 41.9
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 1.7e-09 67.8 277 29.2
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 2.2e-09 67.4 246 29.3
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 2.2e-09 67.4 263 28.9
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 2.2e-09 67.4 263 28.9
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 2.9e-09 67.0 266 28.6
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 2.9e-09 67.0 291 28.9
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 3.7e-09 66.6 121 42.1
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 3.7e-09 66.6 125 36.0
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 4.9e-09 66.2 267 29.2
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 4.9e-09 66.2 122 37.7
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 4.9e-09 66.2 122 37.7
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 6.3e-09 65.9 272 26.8
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 8.3e-09 65.5 101 42.6
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 8.3e-09 65.5 304 27.3
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 8.3e-09 65.5 304 27.3
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 8.3e-09 65.5 95 42.1
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 8.3e-09 65.5 97 43.3
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 1.1e-08 65.1 274 29.2
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 1.4e-08 64.7 94 42.6
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 1.8e-08 64.3 289 29.1
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 1.8e-08 64.3 305 28.5
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.8e-08 64.3 105 37.1
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.8e-08 64.3 305 26.2
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 2.4e-08 63.9 119 39.5
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.4e-08 63.9 95 41.1
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.4e-08 63.9 95 41.1
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.4e-08 63.9 95 41.1
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.4e-08 63.9 100 41.0
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 2.4e-08 63.9 242 31.8
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 3.2e-08 63.5 273 28.9
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 4.1e-08 63.2 129 31.8
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.1e-08 63.2 95 41.1
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 5.4e-08 62.8 147 34.7
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 7.0e-08 62.4 144 31.9
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 7.0e-08 62.4 116 36.2
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 7.0e-08 62.4 107 36.4
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 9.2e-08 62.0 266 27.4
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 9.2e-08 62.0 284 26.1
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 9.2e-08 62.0 95 36.8
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 1.2e-07 61.6 114 36.8
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 1.6e-07 61.2 116 39.7
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 1.6e-07 61.2 264 26.9
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 1.6e-07 61.2 97 38.1
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 3.5e-07 60.1 271 28.4
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 3.5e-07 60.1 93 44.1
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 3.5e-07 60.1 274 28.1
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 3.5e-07 60.1 263 27.4
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 4.6e-07 59.7 288 28.1
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 4.6e-07 59.7 131 32.8
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 4.6e-07 59.7 114 37.7
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 5.9e-07 59.3 302 24.8
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 5.9e-07 59.3 127 35.4
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 1.0e-06 58.5 286 26.9
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 1.0e-06 58.5 282 28.7
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 1.0e-06 58.5 283 27.9
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 1.0e-06 58.5 282 28.7
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 1.0e-06 58.5 107 38.3
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 1.3e-06 58.2 274 28.1
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 1.3e-06 58.2 109 35.8
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 1.3e-06 58.2 216 28.2
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.3e-06 58.2 116 32.8
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 1.7e-06 57.8 283 27.9
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 1.7e-06 57.8 99 39.4
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 1.7e-06 57.8 155 29.7
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.7e-06 57.8 94 39.4
Aqoxy1G00397_Aqoxy1G00398 Aquilegia oxysepala HOM05D007266 ORTHO05D005982 2.3e-06 57.4 99 38.4
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 2.3e-06 57.4 273 28.9
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 2.3e-06 57.4 119 37.0
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 2.3e-06 57.4 106 34.9
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 2.9e-06 57.0 295 23.4
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 3.9e-06 56.6 111 38.7
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 5.0e-06 56.2 89 36.0
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 8.6e-06 55.5 93 41.9
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 8.6e-06 55.5 275 26.9
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 8.6e-06 55.5 205 30.2


User provided reference genes

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