Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 1.2e-86 323.2 165 100.0
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 3.5e-38 162.2 166 61.4
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 2.1e-35 152.9 166 59.0
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 1.3e-27 127.1 165 49.1
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 4.5e-25 118.6 174 47.1
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.3e-24 117.1 165 48.5
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 1.7e-24 116.7 164 48.8
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 3.8e-24 115.5 167 47.3
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 4.9e-24 115.2 174 47.7
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.9e-23 113.2 166 44.6
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.9e-23 113.2 165 47.9
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 2.4e-23 112.8 145 51.7
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 3.2e-23 112.5 161 46.0
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 4.2e-23 112.1 165 47.3
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 5.4e-23 111.7 170 45.9
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 7.1e-23 111.3 169 46.7
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 1.8e-21 106.7 141 46.8
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 2.3e-21 106.3 96 62.5
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.3e-21 106.3 180 45.6
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 2.3e-21 106.3 146 47.9
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 2.3e-21 106.3 139 51.8
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 2.3e-21 106.3 92 68.5
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 3.0e-21 105.9 104 57.7
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 3.0e-21 105.9 141 49.6
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 3.9e-21 105.5 92 67.4
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 3.9e-21 105.5 141 47.5
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 8.7e-21 104.4 135 49.6
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.1e-20 104.0 164 47.0
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.1e-20 104.0 143 46.2
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.1e-20 104.0 139 47.5
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.5e-20 103.6 148 45.9
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 1.5e-20 103.6 149 49.0
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 1.9e-20 103.2 113 56.6
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 2.5e-20 102.8 106 55.7
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 3.3e-20 102.4 157 46.5
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 3.3e-20 102.4 96 60.4
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 4.3e-20 102.1 77 71.4
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 4.3e-20 102.1 119 54.6
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 5.6e-20 101.7 133 49.6
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 7.4e-20 101.3 145 49.7
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 7.4e-20 101.3 119 52.1
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 7.4e-20 101.3 97 60.8
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 7.4e-20 101.3 95 65.3
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 9.6e-20 100.9 124 50.8
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.3e-19 100.5 83 66.3
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 2.8e-19 99.4 74 71.6
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 3.6e-19 99.0 77 70.1
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 4.8e-19 98.6 139 48.9
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 4.8e-19 98.6 139 48.9
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 4.8e-19 98.6 139 47.5
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 6.2e-19 98.2 168 42.9
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 8.1e-19 97.8 78 70.5
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 8.1e-19 97.8 95 63.2
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 8.1e-19 97.8 121 49.6
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 8.1e-19 97.8 141 44.0
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 1.1e-18 97.4 77 68.8
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.1e-18 97.4 163 44.8
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 1.1e-18 97.4 96 60.4
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.8e-18 96.7 106 58.5
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 2.4e-18 96.3 166 42.8
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 2.4e-18 96.3 97 55.7
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 3.1e-18 95.9 74 67.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 3.1e-18 95.9 77 67.5
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 3.1e-18 95.9 77 68.8
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 3.1e-18 95.9 74 68.9
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 4.0e-18 95.5 74 68.9
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 5.3e-18 95.1 74 68.9
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 6.9e-18 94.7 92 58.7
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 1.2e-17 94.0 103 55.3
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.2e-17 94.0 91 59.3
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 1.2e-17 94.0 91 59.3
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.5e-17 93.6 87 63.2
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 1.5e-17 93.6 93 57.0
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.0e-17 93.2 92 57.6
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 2.0e-17 93.2 74 70.3
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 3.4e-17 92.4 95 57.9
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 5.8e-17 91.7 84 61.9
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 9.9e-17 90.9 100 58.0
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 9.9e-17 90.9 91 58.2
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 9.9e-17 90.9 138 47.1
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.3e-16 90.5 61 83.6
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 4.9e-16 88.6 107 53.3
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 4.9e-16 88.6 81 58.0
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 7.1e-15 84.7 91 57.1
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 7.1e-15 84.7 82 58.5
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 1.2e-14 84.0 80 58.8
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 1.6e-14 83.6 87 57.5
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 1.6e-14 83.6 87 57.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 4.6e-14 82.0 68 64.7
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.3e-13 80.5 79 59.5
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 1.3e-13 80.5 63 77.8
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 5.1e-13 78.6 90 52.2
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 5.3e-10 68.6 134 39.6
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 6.9e-10 68.2 127 40.2
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 5.8e-09 65.1 86 47.7
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 2.5e-07 59.7 74 43.2
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 3.2e-07 59.3 138 33.3
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 1.2e-06 57.4 62 46.8
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 2.7e-06 56.2 58 50.0
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 7.9e-06 54.7 73 46.6


User provided reference genes

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