Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33598 Striga asiatica HOM05D000003 ORTHO05D000006 6.3e-151 537.3 258 100.0
SGA_v2.0_scaffold18G08392 Striga asiatica HOM05D000003 ORTHO05D000006 6.3e-18 95.5 187 38.5
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 6.5e-15 85.5 195 32.8
SGA_v2.0_scaffold43G16292 Striga asiatica HOM05D000003 ORTHO05D000006 5.5e-14 82.4 115 43.5
SGA_v2.0_scaffold31G12850 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-13 81.3 116 39.7
SGA_v2.0_scaffold821G53642 Striga asiatica HOM05D000003 ORTHO05D000006 1.6e-13 80.9 157 33.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.6e-13 79.7 158 33.5
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 3.6e-13 79.7 158 32.9
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 6.1e-13 79.0 127 35.4
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.0e-12 78.2 176 33.5
SGA_v2.0_scaffold83G26411 Striga asiatica HOM05D000003 ORTHO05D000006 1.0e-12 78.2 157 33.1
SGA_v2.0_scaffold200G41298 Striga asiatica HOM05D000003 ORTHO05D000006 1.8e-12 77.4 158 34.2
SGA_v2.0_scaffold272G46371 Striga asiatica HOM05D000003 ORTHO05D000006 2.3e-12 77.0 157 33.8
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 3.0e-12 76.6 157 32.5
SGA_v2.0_scaffold128G34102 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-12 76.3 124 36.3
SGA_v2.0_scaffold154G37136 Striga asiatica HOM05D017085 ORTHO05D000006 5.2e-12 75.9 125 35.2
SGA_v2.0_scaffold14G07079 Striga asiatica HOM05D000003 ORTHO05D000006 8.8e-12 75.1 123 37.4
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 5.7e-11 72.4 161 32.3
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-10 71.2 159 29.6
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 3.7e-10 69.7 126 33.3
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.8e-10 69.3 159 28.9
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.3e-10 68.9 140 30.7
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-09 68.2 124 33.9
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-09 67.8 146 28.8
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-09 67.4 157 29.9
Rhsim01G0119200 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.1e-09 66.2 157 29.9
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-09 66.2 160 31.2
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 5.4e-09 65.9 142 31.7
Dinv13289 Davidia involucrata HOM05D000003 ORTHO05D000006 5.4e-09 65.9 131 35.9
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.4e-09 65.9 171 29.8
SGA_v2.0_scaffold241G44224 Striga asiatica HOM05D000003 ORTHO05D000006 9.1e-09 65.1 151 29.1
BcaB04g18725 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-08 64.7 117 32.5
BcaC09g49255 Brassica carinata HOM05D000003 ORTHO05D000006 1.6e-08 64.3 125 29.6
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 1.6e-08 64.3 158 29.1
SGA_v2.0_scaffold30G12507 Striga asiatica HOM05D011952 ORTHO05D000006 2.0e-08 63.9 107 37.4
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 3.5e-08 63.2 150 32.0
SGA_v2.0_scaffold241G44177 Striga asiatica HOM05D000003 ORTHO05D000006 3.5e-08 63.2 119 30.3
SGA_v2.0_scaffold84G26526 Striga asiatica HOM05D018498 ORTHO05D000006 3.5e-08 63.2 125 33.6
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-08 62.8 130 32.3
BcaC06g36381 Brassica carinata HOM05D000003 ORTHO05D000006 5.9e-08 62.4 126 31.7
Dinv36946 Davidia involucrata HOM05D000003 ORTHO05D000006 5.9e-08 62.4 150 30.0
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 5.9e-08 62.4 75 41.3
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 7.7e-08 62.0 126 31.7
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 1.7e-07 60.8 135 29.6
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.7e-07 60.8 180 28.3
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-07 60.8 158 29.1
Rhsim09G0090900 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-07 60.5 121 30.6
QL01p027762 Quercus lobata HOM05D000003 ORTHO05D000006 2.9e-07 60.1 157 26.8
QL01p027824 Quercus lobata HOM05D000003 ORTHO05D000006 2.9e-07 60.1 157 26.8
SGA_v2.0_scaffold221G42729 Striga asiatica HOM05D000003 ORTHO05D000006 2.9e-07 60.1 109 34.9
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 59.7 130 26.9
Dinv38129 Davidia involucrata HOM05D000003 ORTHO05D000006 3.8e-07 59.7 123 31.7
Aa31LG8G11280 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.1e-06 58.2 129 30.2
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-06 57.4 131 26.7
SGA_v2.0_scaffold19G08617 Striga asiatica HOM05D000003 ORTHO05D000006 2.5e-06 57.0 80 36.2
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 56.6 124 25.0
BcaC07g37790 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 56.6 131 27.5
BcaC01g01227 Brassica carinata HOM05D000003 ORTHO05D000006 4.2e-06 56.2 114 31.6
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-06 55.8 135 28.9
BcaC05g27874 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-06 55.5 129 25.6
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-06 55.5 127 29.9
PSO478G2755 Papaver somniferum HOM05D000003 ORTHO05D000006 7.2e-06 55.5 202 23.3
PSO675G1532 Papaver somniferum HOM05D000003 ORTHO05D000006 7.2e-06 55.5 202 23.3
QL03p012384 Quercus lobata HOM05D000003 ORTHO05D000006 7.2e-06 55.5 133 25.6
Aa31LG6G7750 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.4e-06 55.1 129 29.5
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-06 55.1 114 29.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-06 55.1 125 28.0
BolC6t38194H Brassica oleracea HOM05D000003 ORTHO05D000006 9.4e-06 55.1 157 28.7


User provided reference genes

Program Settings