Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33588 Striga asiatica HOM05D018757 ORTHO05D000562 3.2e-173 611.7 314 100.0
SGA_v2.0_scaffold134G34683 Striga asiatica HOM05D018757 ORTHO05D000562 3.2e-133 478.8 298 86.9
SGA_v2.0_scaffold280G46865 Striga asiatica HOM05D018757 ORTHO05D000562 3.4e-98 362.5 281 74.0
SGA_v2.0_scaffold224G42987 Striga asiatica HOM05D018757 ORTHO05D000562 3.5e-95 352.4 278 69.4
SGA_v2.0_scaffold15G07427 Striga asiatica HOM05D018757 ORTHO05D000562 8.2e-36 155.2 333 35.1
AUR62039530 Chenopodium quinoa HOM05D012566 ORTHO05D000562 5.9e-26 122.5 175 36.0
Ah.01g016390 Amaranthus hybridus HOM05D000593 ORTHO05D000562 3.8e-25 119.8 204 34.3
Ah.01g016220 Amaranthus hybridus HOM05D012566 ORTHO05D000562 5.0e-25 119.4 204 34.3
Ah.01g016320 Amaranthus hybridus HOM05D012566 ORTHO05D000562 7.2e-24 115.5 204 33.8
AUR62039874 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.2e-23 114.8 288 36.8
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 3.6e-23 113.2 326 28.8
Ah.06g193770 Amaranthus hybridus HOM05D018757 ORTHO05D002268 1.3e-20 104.8 188 29.3
Ah.12g052860 Amaranthus hybridus HOM05D009642 ORTHO05D011683 8.2e-20 102.1 187 32.1
AUR62022257 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.4e-19 101.3 171 35.7
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 4.5e-18 96.3 189 30.2
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 7.7e-18 95.5 190 32.1
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-17 94.7 189 29.6
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-17 94.7 189 30.2
AUR62008504 Chenopodium quinoa HOM05D012566 ORTHO05D000562 3.2e-16 90.1 226 34.1
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 3.6e-15 86.7 197 27.4
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-14 84.7 206 28.2
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.4e-14 84.7 195 27.7
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.8e-14 84.3 198 28.3
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.8e-14 84.3 185 27.6
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 3.0e-14 83.6 299 26.1
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.0e-14 83.6 185 29.7
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.9e-14 83.2 192 28.1
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.9e-14 83.2 192 28.1
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 6.7e-14 82.4 175 32.0
SGA_v2.0_scaffold59G20782 Striga asiatica HOM05D018757 ORTHO05D400267 6.7e-14 82.4 53 79.2
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 6.7e-14 82.4 178 28.1
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-13 81.6 298 25.2
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 1.1e-13 81.6 193 25.4
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.1e-13 81.6 193 25.4
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.1e-13 81.6 192 28.6
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-13 81.3 172 29.1
Gorai.006G065500 Gossypium raimondii HOM05D000593 ORTHO05D000562 2.0e-13 80.9 189 29.6
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 2.6e-13 80.5 192 28.1
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.3e-13 80.1 193 26.9
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 3.3e-13 80.1 187 30.5
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.3e-13 80.1 208 26.0
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.4e-13 79.7 195 27.7
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 5.7e-13 79.3 202 30.7
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.3e-12 78.2 190 24.7
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-12 77.8 178 30.3
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.2e-12 77.4 176 28.4
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-12 77.4 198 30.8
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 2.8e-12 77.0 282 28.4
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.8e-12 77.0 172 29.1
Gohir.D07G195440 Gossypium hirsutum HOM05D000593 ORTHO05D000562 2.8e-12 77.0 175 30.3
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.7e-12 76.6 184 27.7
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.7e-12 76.6 184 25.5
Ah.12g052880 Amaranthus hybridus HOM05D009642 ORTHO05D011683 4.8e-12 76.3 147 29.3
Gorai.005G173000 Gossypium raimondii HOM05D000593 ORTHO05D000562 4.8e-12 76.3 174 30.5
Gorai.008G062800 Gossypium raimondii HOM05D000593 ORTHO05D000562 4.8e-12 76.3 158 32.9
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-12 76.3 198 30.8
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.8e-12 76.3 176 28.4
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 6.3e-12 75.9 198 26.8
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.3e-12 75.9 198 26.8
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 6.3e-12 75.9 194 27.3
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.2e-12 75.5 200 27.0
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-11 75.1 185 27.6
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-11 74.3 191 29.8
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 2.4e-11 73.9 191 26.2
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-11 73.9 198 31.3
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 3.1e-11 73.6 160 33.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.1e-11 73.6 160 33.1
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 4.1e-11 73.2 166 28.9
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 4.1e-11 73.2 191 27.2
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.1e-11 73.2 192 26.0
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.3e-11 72.8 176 26.7
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 5.3e-11 72.8 180 28.9
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 7.0e-11 72.4 192 26.0
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 7.0e-11 72.4 205 26.8
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 7.0e-11 72.4 190 25.8
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-11 72.4 198 30.3
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-11 72.4 183 25.7
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 7.0e-11 72.4 189 27.0
Aqoxy1G03120 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 9.1e-11 72.0 190 27.4
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 9.1e-11 72.0 188 26.6
Gohir.D02G153950 Gossypium hirsutum HOM05D000593 ORTHO05D000562 9.1e-11 72.0 174 29.9
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 9.1e-11 72.0 161 27.3
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.2e-10 71.6 191 28.8
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 1.2e-10 71.6 190 28.4
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-10 71.6 173 27.7
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-10 71.6 161 27.3
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 1.6e-10 71.2 188 27.1
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 1.6e-10 71.2 190 27.9
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 1.6e-10 71.2 190 27.9
ECA233G2800 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.0e-10 70.9 184 27.2
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-10 70.9 163 28.8
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.0e-10 70.9 180 27.2
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.6e-10 70.5 172 27.3
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.5e-10 70.1 163 29.4
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.5e-10 70.1 185 25.9
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 4.5e-10 69.7 182 28.0
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 4.5e-10 69.7 172 31.4
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.5e-10 69.7 164 28.7
Gorai.004G152900 Gossypium raimondii HOM05D000593 ORTHO05D000562 5.9e-10 69.3 189 28.6
Gorai.010G106000 Gossypium raimondii HOM05D000593 ORTHO05D000562 5.9e-10 69.3 174 29.9
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 5.9e-10 69.3 197 28.9
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 5.9e-10 69.3 167 30.5
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 5.9e-10 69.3 191 22.5
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 5.9e-10 69.3 173 27.7
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.7e-10 68.9 166 28.3
ECA233G1330 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.7e-10 68.9 184 27.2
ECA248G1709 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.0e-09 68.6 184 26.6
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 1.0e-09 68.6 199 23.6
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 1.0e-09 68.6 199 23.6
Migut.D01884 Erythranthe guttata HOM05D000593 ORTHO05D000562 1.7e-09 67.8 200 24.0
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.7e-09 67.8 210 26.7
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-09 67.4 191 24.6
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-09 67.0 183 25.1
TWI36G1263 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 2.9e-09 67.0 173 27.2
ECA234G2373 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.8e-09 66.6 184 26.6
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 3.8e-09 66.6 199 23.1
SGA_v2.0_scaffold162G37890 Striga asiatica HOM05D003216 ORTHO05D002268 3.8e-09 66.6 152 32.2
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.8e-09 66.6 187 25.1
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 5.0e-09 66.2 174 25.9
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.0e-09 66.2 164 28.0
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 8.5e-09 65.5 182 26.9
Gorai.007G053200 Gossypium raimondii HOM05D000593 ORTHO05D000562 8.5e-09 65.5 181 27.1
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.5e-09 65.5 187 25.1
HanXRQChr08g0215981 Helianthus annuus HOM05D000593 ORTHO05D002268 1.1e-08 65.1 211 23.7
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-08 65.1 189 22.2
Medtr4g065057 Medicago truncatula HOM05D003216 ORTHO05D002268 2.5e-08 63.9 197 27.9
ECA233G4219 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.2e-08 63.5 194 25.3
ECA240G3759 Erigeron canadensis HOM05D000593 ORTHO05D002268 3.2e-08 63.5 163 26.4
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 3.2e-08 63.5 155 27.7
ECA247G1059 Erigeron canadensis HOM05D000593 ORTHO05D002268 3.2e-08 63.5 164 27.4
ECA247G1992 Erigeron canadensis HOM05D000710 ORTHO05D000336 3.2e-08 63.5 155 27.7
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-08 63.5 183 25.1
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.2e-08 63.5 192 24.0
AUR62034795 Chenopodium quinoa HOM05D012566 ORTHO05D000562 4.2e-08 63.2 149 30.9
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.2e-08 63.2 202 23.8
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.5e-08 62.8 179 25.1
ECA233G0180 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.2e-08 62.4 184 25.5
ECA240G0778 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.2e-08 62.4 184 25.5
HanXRQChr15g0483301 Helianthus annuus HOM05D000593 ORTHO05D002268 7.2e-08 62.4 103 34.0
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 7.2e-08 62.4 193 24.9
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 7.2e-08 62.4 174 25.3
Medtr2g067680 Medicago truncatula HOM05D003216 ORTHO05D002268 9.4e-08 62.0 179 26.8
Medtr8g040220 Medicago truncatula HOM05D003216 ORTHO05D002268 9.4e-08 62.0 156 27.6
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 9.4e-08 62.0 173 24.3
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.4e-08 62.0 179 25.1
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 9.4e-08 62.0 172 26.7
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 1.2e-07 61.6 180 25.6
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 1.6e-07 61.2 173 24.3
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-07 61.2 196 26.0
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-07 60.8 83 37.3
AUR62015704 Chenopodium quinoa HOM05D012566 ORTHO05D000562 2.7e-07 60.5 151 41.1
AUR62015706 Chenopodium quinoa HOM05D012566 ORTHO05D000562 2.7e-07 60.5 151 41.1
Medtr2g034775 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-07 60.5 75 37.3
AUR62042616 Chenopodium quinoa HOM05D012566 ORTHO05D000562 3.6e-07 60.1 159 27.0
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 8.0e-07 58.9 75 36.0
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-06 58.5 169 26.6
TPR.G22014 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-06 58.2 178 23.6
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 1.8e-06 57.8 185 23.8
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 2.3e-06 57.4 192 20.8
ECA234G2807 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.0e-06 57.0 189 26.5
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 3.0e-06 57.0 202 23.8
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-06 57.0 163 27.6
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-06 56.6 157 28.7
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.7e-06 55.8 75 34.7
ECA238G0368 Erigeron canadensis HOM05D000609 ORTHO05D000462 8.8e-06 55.5 60 41.7
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 8.8e-06 55.5 78 38.5
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 8.8e-06 55.5 62 41.9
TPR.G22653 Trifolium pratense HOM05D003216 ORTHO05D002268 8.8e-06 55.5 145 24.8
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 8.8e-06 55.5 163 28.8


User provided reference genes

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