Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33587 Striga asiatica HOM05D018751 ORTHO05D012560 1.8e-107 392.5 182 100.0
SGA_v2.0_scaffold134G34684 Striga asiatica HOM05D018751 ORTHO05D012560 5.5e-101 370.9 182 95.6
SGA_v2.0_scaffold280G46866 Striga asiatica HOM05D018751 ORTHO05D012560 2.5e-93 345.5 182 91.2
SGA_v2.0_scaffold49G18173 Striga asiatica HOM05D018751 ORTHO05D012560 1.3e-57 226.9 177 65.5
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-18 97.1 151 37.1
EL10Ac2g04591 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-18 95.5 120 40.8
EL10Ac6g14750 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-18 95.5 120 40.8
EL10Ac6g15299 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-18 95.5 120 40.8
EL10Ac1g00589 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-18 95.1 120 40.8
EL10Ac3g07230 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-18 95.1 120 40.8
EL10Ac5g11477 Beta vulgaris HOM05D000176 ORTHO05D000106 5.8e-18 95.1 120 40.8
EL10Ac2g02456 Beta vulgaris HOM05D000176 ORTHO05D000106 1.3e-17 94.0 120 40.8
EL10Ac6g14325 Beta vulgaris HOM05D000176 ORTHO05D000106 2.2e-17 93.2 120 39.2
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 3.8e-17 92.4 162 32.1
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 8.4e-17 91.3 146 34.2
EL10Ac4g09361 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-16 90.1 120 39.2
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.6e-15 87.0 173 30.6
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 2.7e-15 86.3 115 37.4
EL10Ac4g08722 Beta vulgaris HOM05D000176 ORTHO05D012560 3.5e-15 85.9 119 38.7
Ah.01g016330 Amaranthus hybridus HOM05D018751 ORTHO05D012560 4.6e-15 85.5 115 37.4
EL10Ac9g20851 Beta vulgaris HOM05D000176 ORTHO05D012560 8.7e-14 81.3 125 31.2
EL10Ac1g01147 Beta vulgaris HOM05D000176 ORTHO05D012560 1.5e-13 80.5 114 36.0
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-10 70.9 121 35.5
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-10 70.5 121 35.5
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-10 70.5 121 35.5
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-10 70.5 128 35.9
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 2.6e-10 69.7 121 34.7
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-10 69.3 90 38.9
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-10 68.9 85 40.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-10 68.9 128 34.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-10 68.9 128 34.4
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-10 68.9 128 34.4
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 4.5e-10 68.9 118 36.4
EL10Ac6g14181 Beta vulgaris HOM05D000176 ORTHO05D012560 1.3e-09 67.4 73 41.1
EL10Ac6g14384 Beta vulgaris HOM05D000176 ORTHO05D012560 1.3e-09 67.4 73 41.1
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-09 67.0 128 34.4
EL10Ac7g17812 Beta vulgaris HOM05D000176 ORTHO05D000106 2.9e-09 66.2 86 38.4
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 8.4e-09 64.7 82 39.0
EL10Ac2g04872 Beta vulgaris HOM05D000176 ORTHO05D000106 8.4e-09 64.7 82 39.0
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-08 63.9 126 34.9
PSO675G0665 Papaver somniferum HOM05D013701 ORTHO05D012560 1.4e-08 63.9 122 32.0
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.9e-08 63.5 108 38.9
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.9e-08 63.5 134 32.1
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-08 62.8 109 33.9
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-08 62.8 121 33.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 4.2e-08 62.4 117 34.2
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 5.5e-08 62.0 171 29.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 7.1e-08 61.6 118 34.7
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-08 61.6 129 34.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.8 112 34.8
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.2e-07 60.8 113 31.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-07 60.5 127 33.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-07 59.3 114 35.1
PSO675G4184 Papaver somniferum HOM05D013701 ORTHO05D012560 3.5e-07 59.3 119 33.6
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 124 33.1
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 124 33.1
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 124 33.1
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 6.0e-07 58.5 63 44.4
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-07 58.5 109 31.2
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-07 58.5 109 31.2
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-07 58.5 114 35.1
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-07 58.5 109 31.2
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 7.9e-07 58.2 124 32.3
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-07 58.2 113 32.7
EL10Ac9g20755 Beta vulgaris HOM05D000176 ORTHO05D000106 1.0e-06 57.8 82 36.6
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-06 57.8 121 29.8
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.0e-06 57.8 135 25.2
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.3e-06 57.4 140 27.9
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-06 57.0 121 31.4
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 56.6 111 32.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-06 56.2 113 30.1
PSO063G0537 Papaver somniferum HOM05D000176 ORTHO05D000106 3.0e-06 56.2 96 34.4
EL10Ac1g02224 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-06 55.8 50 52.0
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-06 55.8 79 40.5
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-06 55.8 124 32.3
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-06 55.8 115 33.0
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-06 55.5 126 29.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-06 55.5 102 31.4
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.7e-06 55.1 101 31.7
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.7e-06 55.1 101 32.7
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 6.7e-06 55.1 101 32.7
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-06 55.1 109 32.1
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-06 55.1 109 33.9
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-06 54.7 112 29.5


User provided reference genes

Program Settings