Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 1.2e-74 283.1 145 100.0
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 8.7e-25 117.5 110 53.6
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.9e-24 116.3 110 53.6
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.2e-20 102.8 100 57.0
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 6.5e-20 101.3 128 50.8
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 2.1e-18 96.3 132 50.0
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 6.0e-18 94.7 112 50.9
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 8.7e-17 90.9 112 46.4
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 7.4e-16 87.8 99 45.5
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 7.4e-16 87.8 129 43.4
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 6.9e-14 81.3 115 45.2
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 6.9e-14 81.3 106 47.2
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.2e-13 80.5 98 51.0
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 1.2e-13 80.5 127 44.9
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 1.2e-13 80.5 97 48.5
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 2.6e-13 79.3 92 47.8
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 2.6e-13 79.3 108 43.5
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.4e-13 79.0 125 42.4
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 5.9e-13 78.2 105 45.7
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 7.7e-13 77.8 108 42.6
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 1.3e-12 77.0 95 44.2
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 1.7e-12 76.6 114 43.0
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.8e-12 75.5 102 43.1
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 1.1e-11 73.9 104 41.3
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 5.5e-11 71.6 121 35.5
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 5.5e-11 71.6 110 40.9
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 9.4e-11 70.9 123 38.2
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.2e-10 70.5 108 38.0
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.2e-10 70.5 111 37.8
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 3.6e-10 68.9 119 38.7
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 4.6e-10 68.6 116 38.8
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 4.6e-10 68.6 108 38.0
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 6.1e-10 68.2 118 41.5
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 1.0e-09 67.4 105 42.9
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 1.0e-09 67.4 81 48.1
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 1.0e-09 67.4 115 34.8
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 3.0e-09 65.9 129 36.4
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 6.7e-09 64.7 113 41.6
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 8.8e-09 64.3 110 41.8
Eucgr.G02340 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.1e-08 63.9 109 37.6
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 2.0e-08 63.2 108 38.0
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 2.5e-08 62.8 126 33.3
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 3.3e-08 62.4 98 36.7
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 4.3e-08 62.0 108 40.7
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 1.3e-07 60.5 98 36.7
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 2.8e-07 59.3 103 36.9
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 2.8e-07 59.3 98 33.7
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 3.7e-07 58.9 103 35.0
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 3.7e-07 58.9 112 37.5
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 4.8e-07 58.5 115 38.3
Sed0016132 Sechium edule HOM05D030371 ORTHO05D009661 4.8e-07 58.5 100 43.0
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 1.1e-06 57.4 99 38.4
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 4.1e-06 55.5 100 37.0
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 4.1e-06 55.5 98 36.7
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 9.1e-06 54.3 116 36.2


User provided reference genes

Program Settings