Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33561 Striga asiatica HOM05D016084 ORTHO05D014211 1.1e-144 516.5 252 100.0
SGA_v2.0_scaffold446G51736 Striga asiatica HOM05D016084 ORTHO05D014211 1.6e-135 486.1 250 96.4
SGA_v2.0_scaffold11G05546 Striga asiatica HOM05D016084 ORTHO05D014211 4.9e-108 394.8 323 65.6
SGA_v2.0_scaffold294G47477 Striga asiatica HOM05D016084 ORTHO05D014211 1.2e-34 151.0 104 77.9
SGA_v2.0_scaffold68G22968 Striga asiatica HOM05D063762 ORTHO05D014211 1.6e-18 97.4 91 45.1
Migut.O00430 Erythranthe guttata HOM05D016084 ORTHO05D014211 2.6e-16 90.1 106 43.4
SGA_v2.0_scaffold57G20302 Striga asiatica HOM05D017547 ORTHO05D014211 9.8e-16 88.2 117 38.5
SGA_v2.0_scaffold93G28341 Striga asiatica HOM05D016084 ORTHO05D014211 1.4e-14 84.3 219 31.5
Rhsim09G0050000 Rhododendron simsii HOM05D003191 ORTHO05D003656 5.1e-12 75.9 158 28.5
Rhsim07G0151200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-11 73.9 163 29.4
Migut.E00584 Erythranthe guttata HOM05D016084 ORTHO05D014211 4.3e-11 72.8 143 33.6
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-10 70.9 125 33.6
SGA_v2.0_scaffold552G52881 Striga asiatica HOM05D017547 ORTHO05D014211 6.2e-10 68.9 92 38.0
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 8.1e-10 68.6 125 28.0
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.1e-10 68.6 124 30.6
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.1e-10 68.6 124 30.6
SGA_v2.0_scaffold360G49891 Striga asiatica HOM05D063762 ORTHO05D014211 1.1e-09 68.2 71 42.3
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-09 67.4 105 34.3
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-09 67.4 125 32.8
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 8.9e-09 65.1 125 27.2
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 1.2e-08 64.7 110 30.9
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 3.4e-08 63.2 103 31.1
HanXRQChr06g0172321 Helianthus annuus HOM05D008850 ORTHO05D004107 4.4e-08 62.8 192 27.6
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.4e-08 62.8 127 33.1
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 7.6e-08 62.0 167 26.3
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 9.9e-08 61.6 101 31.7
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-08 61.6 125 24.8
Lj8C477G0 Lonicera japonica HOM05D016084 ORTHO05D004107 9.9e-08 61.6 125 30.4
SGA_v2.0_scaffold55G19789 Striga asiatica HOM05D016084 ORTHO05D014211 1.3e-07 61.2 121 33.9
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 2.9e-07 60.1 108 28.7
Dinv13277 Davidia involucrata HOM05D014922 ORTHO05D004107 2.4e-06 57.0 123 30.1
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-06 57.0 110 30.9
SGA_v2.0_scaffold10G05288 Striga asiatica HOM05D017547 ORTHO05D014211 3.2e-06 56.6 170 25.9
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 9.2e-06 55.1 135 31.1
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.2e-06 55.1 118 29.7


User provided reference genes

Program Settings