Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33520 Striga asiatica HOM05D008112 ORTHO05D010225 4.6e-52 207.6 104 100.0
Migut.E00342 Erythranthe guttata HOM05D008112 ORTHO05D010225 1.3e-19 99.8 113 54.0
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 1.9e-18 95.9 103 53.4
MSTRG.840 Avicennia marina HOM05D008112 ORTHO05D010225 5.3e-16 87.8 111 48.6
SalBow8G4149 Salvia bowleyana HOM05D008112 ORTHO05D010225 1.0e-14 83.6 104 48.1
Migut.L01063 Erythranthe guttata HOM05D008112 ORTHO05D010225 4.2e-13 78.2 117 44.4
DCAR_023658 Daucus carota HOM05D008112 ORTHO05D010225 1.2e-12 76.6 113 44.2
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 5.7e-10 67.8 109 40.4
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 9.7e-10 67.0 103 43.7
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 2.2e-09 65.9 100 41.0
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 6.3e-09 64.3 108 38.9
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 8.2e-09 63.9 97 40.2
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 8.2e-09 63.9 97 40.2
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 8.2e-09 63.9 107 38.3
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.1e-08 63.5 97 40.2
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 1.4e-08 63.2 91 39.6
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 1.4e-08 63.2 112 39.3
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 1.8e-08 62.8 104 39.4
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 1.8e-08 62.8 109 41.3
Dinv31638 Davidia involucrata HOM05D008112 ORTHO05D010225 3.1e-08 62.0 70 48.6
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 3.1e-08 62.0 104 39.4
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.1e-08 62.0 104 39.4
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.1e-08 62.0 104 39.4
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 6.9e-08 60.8 110 37.3
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 9.1e-08 60.5 100 36.0
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 1.5e-07 59.7 101 37.6
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 2.0e-07 59.3 109 39.4
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 2.0e-07 59.3 107 39.3
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.0e-07 59.3 103 41.7
Lsat_1_v5_gn_4_17580 Lactuca sativa HOM05D008112 ORTHO05D010225 2.6e-07 58.9 102 36.3
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 2.6e-07 58.9 100 38.0
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 4.5e-07 58.2 102 37.3
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.3e-06 56.6 110 35.5
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 1.7e-06 56.2 106 37.7
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.7e-06 56.2 109 37.6
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 2.9e-06 55.5 103 33.0
Lj5g0021475 Lotus japonicus HOM05D008112 ORTHO05D010225 2.9e-06 55.5 92 41.3
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 6.5e-06 54.3 97 40.2
unitig_749.g13177 Utricularia gibba HOM05D008112 ORTHO05D423752 6.5e-06 54.3 93 39.8
unitig_8.g3256 Utricularia gibba HOM05D008112 ORTHO05D010225 6.5e-06 54.3 95 36.8
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 8.5e-06 53.9 81 40.7


User provided reference genes

Program Settings