Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.3e-100 369.0 199 100.0
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.2e-53 213.8 168 69.0
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.6e-53 213.4 198 63.6
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.6e-53 213.4 197 66.5
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 3.9e-52 208.8 202 60.4
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 8.8e-52 207.6 163 69.3
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 4.4e-51 205.3 173 68.8
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 7.4e-51 204.5 191 62.3
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 7.4e-51 204.5 175 65.1
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.3e-50 203.8 200 61.5
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.7e-50 203.4 175 64.6
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 2.2e-50 203.0 208 61.1
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 2.8e-50 202.6 191 62.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 3.7e-50 202.2 199 59.8
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 6.3e-50 201.4 203 60.1
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 6.3e-50 201.4 175 64.6
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 8.2e-50 201.1 191 61.8
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.4e-49 200.3 191 61.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 5.3e-49 198.4 159 68.6
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.2e-48 197.2 190 63.2
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.6e-48 196.8 181 62.4
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.6e-48 196.8 199 58.8
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.6e-48 196.8 208 57.2
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.0e-48 196.4 183 63.4
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.0e-48 196.4 171 66.1
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.0e-48 196.4 199 59.3
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 2.6e-48 196.1 168 66.7
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 5.9e-48 194.9 168 65.5
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 5.9e-48 194.9 167 67.7
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.3e-47 193.7 165 66.7
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.9e-47 192.6 181 61.9
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 2.9e-47 192.6 187 63.6
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 5.0e-47 191.8 186 61.3
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 6.5e-47 191.4 179 62.6
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 8.5e-47 191.0 169 62.7
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.1e-46 190.7 167 65.9
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.9e-46 189.9 167 64.1
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 1.9e-46 189.9 168 62.5
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.9e-46 189.9 199 58.8
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 4.2e-46 188.7 172 65.1
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 7.2e-46 188.0 165 63.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 9.4e-46 187.6 186 59.1
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 9.4e-46 187.6 174 63.2
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 9.4e-46 187.6 158 63.9
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 8.0e-45 184.5 210 56.7
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 1.4e-44 183.7 157 64.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.4e-44 183.7 201 55.2
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.4e-44 183.7 207 56.5
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.4e-44 183.7 207 56.5
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 1.4e-44 183.7 158 65.8
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.8e-44 183.3 193 58.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.8e-44 183.3 170 60.0
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 2.3e-44 183.0 188 58.0
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 3.0e-44 182.6 158 66.5
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 3.0e-44 182.6 184 57.1
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 5.2e-44 181.8 197 53.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 8.8e-44 181.0 164 63.4
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 8.8e-44 181.0 208 53.4
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 1.2e-43 180.6 162 64.2
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.5e-43 180.3 160 65.0
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.5e-43 180.3 177 58.8
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 2.0e-43 179.9 129 75.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 3.3e-43 179.1 179 59.2
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.3e-43 179.1 129 74.4
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 4.4e-43 178.7 129 73.6
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 7.5e-43 177.9 205 56.1
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 9.7e-43 177.6 174 61.5
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.3e-42 177.2 160 65.6
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.3e-42 177.2 125 72.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 1.3e-42 177.2 212 52.8
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.7e-42 176.8 129 73.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.7e-42 176.8 174 61.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.7e-42 176.8 177 59.9
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.7e-42 175.6 129 72.9
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 3.7e-42 175.6 128 71.9
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.7e-42 175.6 129 72.1
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 4.8e-42 175.3 166 63.3
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.8e-42 175.3 129 72.1
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 6.3e-42 174.9 129 72.9
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 6.3e-42 174.9 206 54.4
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-41 174.1 129 72.1
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.1e-41 174.1 206 54.4
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.4e-41 173.7 177 59.3
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.4e-41 173.7 223 51.1
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.8e-41 173.3 173 57.2
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.8e-41 173.3 173 58.4
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 3.1e-41 172.6 186 57.0
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 4.1e-41 172.2 128 71.1
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 5.3e-41 171.8 173 56.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.2e-40 170.6 162 63.0
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 4.5e-40 168.7 129 68.2
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 4.5e-40 168.7 165 58.8
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 5.9e-40 168.3 142 66.9
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 8.5e-39 164.5 150 62.7
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 1.9e-38 163.3 173 56.1
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.5e-38 162.9 155 60.0
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 2.7e-37 159.5 123 70.7
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 8.0e-37 157.9 161 55.3
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 5.4e-33 145.2 188 49.5
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.7e-31 140.2 101 71.3
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.1e-30 137.5 138 53.6
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 9.5e-30 134.4 125 64.0
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 3.6e-29 132.5 199 43.7
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 3.6e-29 132.5 126 53.2
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 3.7e-26 122.5 132 46.2
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.9e-22 110.2 82 67.1
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 2.0e-19 100.1 70 75.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 6.4e-18 95.1 113 51.3
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.9e-14 83.6 79 54.4
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 1.1e-06 57.8 130 33.1


User provided reference genes

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