Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold123G33495 Striga asiatica HOM05D013482 ORTHO05D012628 3.7e-197 691.4 367 100.0
SGA_v2.0_scaffold111G31464 Striga asiatica HOM05D013482 ORTHO05D012628 6.5e-194 680.6 367 98.6
SGA_v2.0_scaffold229G43308 Striga asiatica HOM05D013482 ORTHO05D012628 6.5e-194 680.6 367 98.6
SGA_v2.0_scaffold229G43309 Striga asiatica HOM05D013482 ORTHO05D012628 6.5e-194 680.6 367 98.6
SGA_v2.0_scaffold27G11687 Striga asiatica HOM05D013482 ORTHO05D012628 6.5e-194 680.6 367 98.6
SGA_v2.0_scaffold111G31465 Striga asiatica HOM05D013482 ORTHO05D012628 3.2e-193 678.3 366 98.4
SGA_v2.0_scaffold38G15091 Striga asiatica HOM05D013482 ORTHO05D012628 7.2e-193 677.2 366 98.1
SGA_v2.0_scaffold406G51052 Striga asiatica HOM05D013482 ORTHO05D012628 3.0e-58 229.9 136 95.6
SGA_v2.0_scaffold15G07158 Striga asiatica HOM05D013482 ORTHO05D012628 5.8e-41 172.6 144 74.3
MSTRG.26904 Avicennia marina HOM05D013482 ORTHO05D012628 4.0e-18 96.7 182 36.3
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-13 81.6 198 27.3
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.3e-13 80.9 338 21.9
MSTRG.22480 Avicennia marina HOM05D013482 ORTHO05D012628 8.7e-13 79.0 168 33.3
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.9e-12 77.8 400 26.5
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 3.3e-12 77.0 400 27.5
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-12 76.6 133 31.6
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-12 75.9 160 29.4
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-12 75.9 145 29.7
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-12 75.5 198 25.8
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.3e-11 75.1 402 26.1
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.6e-11 74.7 198 25.8
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-11 74.3 193 26.4
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.1e-11 74.3 421 23.0
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 8.1e-11 72.4 360 24.7
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.1e-11 72.4 203 26.1
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-10 72.0 154 27.3
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-10 71.2 152 27.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.1e-10 70.5 402 23.9
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-09 68.6 345 22.0
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-09 65.9 153 28.8
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-09 65.5 141 27.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 9.9e-09 65.5 201 24.4
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.7e-08 64.7 140 27.9
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-08 64.7 190 23.7
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 2.2e-08 64.3 283 23.3
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-08 63.5 166 25.9
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-08 63.5 271 25.1
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.9e-08 63.2 314 24.8
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-07 62.0 122 27.9
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-07 61.2 102 29.4
COL.COLO4_20277 Corchorus olitorius HOM05D014876 ORTHO05D012510 2.4e-07 60.8 396 22.5
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-07 60.5 211 28.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-07 60.1 278 24.5
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 5.5e-07 59.7 250 24.8
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 58.5 320 23.8
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.2e-06 58.5 111 26.1
COL.COLO4_15854 Corchorus olitorius HOM05D014876 ORTHO05D012510 1.6e-06 58.2 321 23.4
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.6e-06 58.2 404 22.3
ClCG10G015790 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.1e-06 57.8 225 20.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-06 57.8 376 20.7
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.7e-06 57.4 217 21.2
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-06 57.4 76 34.2
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.7e-06 57.4 271 22.5
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.5e-06 57.0 218 20.6


User provided reference genes

Program Settings