Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-254 880.9 420 100.0
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-202 709.5 436 80.5
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 5.4e-160 568.2 340 80.3
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 6.2e-148 528.1 444 64.2
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-143 513.1 447 63.8
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-139 500.4 446 61.7
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-123 447.2 381 64.8
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-61 240.4 424 37.5
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-60 235.3 386 37.0
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-60 235.3 381 40.9
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-59 234.6 381 39.9
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 7.0e-59 232.3 390 39.2
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 2.9e-52 210.3 397 38.0
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 8.3e-52 208.8 390 36.4
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-51 208.0 389 37.0
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-50 203.0 383 37.6
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-48 198.4 389 37.8
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 8.1e-47 192.2 349 37.5
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 8.1e-47 192.2 364 38.2
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 2.9e-44 183.7 396 34.3
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 5.4e-43 179.5 386 37.3
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 2.3e-41 174.1 159 59.1
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-40 171.4 396 34.6
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 3.3e-40 170.2 345 35.9
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 7.3e-40 169.1 306 35.3
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 6.2e-39 166.0 384 35.7
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 6.8e-38 162.5 153 56.2
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.6e-37 160.6 359 35.1
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.8e-37 159.5 385 32.2
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.7e-36 157.9 392 30.9
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.8e-36 156.8 399 30.8
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.2e-35 152.1 368 29.3
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.2e-35 152.1 371 31.3
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 9.2e-35 152.1 480 28.8
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.6e-34 149.8 393 32.8
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 2.3e-33 147.5 381 29.9
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.5e-32 144.1 402 30.3
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-31 140.6 391 32.0
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-31 140.2 384 33.9
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-30 138.7 405 30.1
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.6e-29 134.0 365 29.9
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.9e-29 132.1 432 27.8
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.4e-27 127.5 365 32.1
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.4e-27 126.3 380 27.1
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 5.4e-27 126.3 399 28.3
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 7.1e-27 125.9 90 70.0
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-26 125.2 392 28.8
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 6.0e-26 122.9 402 28.4
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 6.0e-26 122.9 402 28.4
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-24 118.6 401 28.4
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.9e-24 117.9 328 30.2
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-24 117.5 403 27.8
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 9.6e-24 115.5 211 37.0
Migut.K00647 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.3e-23 115.2 234 32.9
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 1.4e-22 111.7 419 27.2
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 9.0e-22 109.0 403 27.5
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-20 104.8 213 35.2
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 3.2e-19 100.5 250 32.4
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 7.1e-19 99.4 258 32.2
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-18 98.6 384 26.8
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-18 98.6 408 27.5
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-18 97.8 409 26.2
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 5.1e-17 93.2 155 38.7
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.7e-17 92.8 387 25.8
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-17 92.8 395 27.3
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-16 92.0 121 44.6
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-16 90.5 161 40.4
COL.COLO4_23779 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.4e-14 85.1 319 26.0
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.4e-14 84.3 360 25.8
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-14 84.0 359 26.2
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.0e-14 83.6 196 30.6
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-13 82.0 83 51.8
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-13 80.9 93 48.4
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-13 80.1 354 25.7
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 4.5e-13 80.1 91 46.2
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.6e-13 79.3 334 27.5
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.9e-13 79.0 350 27.1
Migut.H00781 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.7e-12 78.2 236 28.0
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 2.2e-12 77.8 317 26.2
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 2.2e-12 77.8 380 26.6
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 2.9e-12 77.4 341 27.0
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 4.9e-12 76.6 309 25.2
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 4.9e-12 76.6 400 25.0
Lj2P495T35 Lonicera japonica HOM05D000151 ORTHO05D000074 8.4e-12 75.9 353 24.4
Dinv22135 Davidia involucrata HOM05D007685 ORTHO05D009136 1.1e-11 75.5 336 25.9
ECA232G2391 Erigeron canadensis HOM05D000151 ORTHO05D000074 1.9e-11 74.7 365 24.4
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 2.5e-11 74.3 301 24.6
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.5e-11 74.3 363 23.1
SalBow5G4249 Salvia bowleyana HOM05D007685 ORTHO05D009136 3.2e-11 73.9 196 33.2
Cc08_g06170 Coffea canephora HOM05D000151 ORTHO05D000074 4.2e-11 73.6 271 25.8
CAN.G1203.1 Capsicum annuum HOM05D013589 ORTHO05D009136 7.1e-11 72.8 218 30.7
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.2e-10 72.0 407 24.6
Nn1g04030 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.2e-10 72.0 283 26.1
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 1.6e-10 71.6 238 28.2
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.6e-10 71.6 377 24.9
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 2.7e-10 70.9 407 25.3
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.5e-10 70.5 344 25.0
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.6e-10 70.1 328 25.9
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 4.6e-10 70.1 305 24.6
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-10 70.1 494 23.1
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 6.0e-10 69.7 357 23.8
Cc08_g14740 Coffea canephora HOM05D000151 ORTHO05D000074 6.0e-10 69.7 283 26.5
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 6.0e-10 69.7 360 24.2
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 1.0e-09 68.9 260 25.4
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.8e-09 68.2 307 26.4
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-09 67.4 283 28.6
Ah.00g000550 Amaranthus hybridus HOM05D000151 ORTHO05D000074 5.1e-09 66.6 402 23.4
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 5.1e-09 66.6 385 24.9
Nn1g04012 Nelumbo nucifera HOM05D000151 ORTHO05D000074 5.1e-09 66.6 279 25.8
Aqoxy2G00530 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-09 66.2 309 24.9
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.7e-09 66.2 359 25.3
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.7e-09 65.9 403 24.6
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.7e-09 65.9 359 25.6
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-08 65.5 239 26.4
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 1.1e-08 65.5 381 23.6
AUR62036751 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.5e-08 65.1 383 23.2
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 1.5e-08 65.1 272 25.7
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.5e-08 64.3 267 25.8
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 3.3e-08 63.9 356 21.3
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 4.3e-08 63.5 355 24.8
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.3e-08 63.5 197 28.4
Prupe.6G183700 Prunus persica HOM05D000151 ORTHO05D000074 4.3e-08 63.5 305 21.6
Dinv28194 Davidia involucrata HOM05D002577 ORTHO05D009136 5.6e-08 63.2 248 27.0
SalBow3G2007 Salvia bowleyana HOM05D000151 ORTHO05D000074 5.6e-08 63.2 375 21.6
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 7.4e-08 62.8 366 24.9
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 9.6e-08 62.4 155 29.0
Thecc.10G030100 Theobroma cacao HOM05D000151 ORTHO05D000074 9.6e-08 62.4 350 24.3
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.6e-08 62.4 353 27.5
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.6e-08 62.4 305 23.6
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-07 61.6 71 49.3
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.6e-07 61.6 332 22.6
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-07 61.2 78 42.3
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-07 61.2 365 23.3
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-07 60.8 78 42.3
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-07 60.8 74 50.0
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-07 60.8 71 47.9
Atru.chr2.1462 Acer truncatum HOM05D000048 ORTHO05D000436 3.7e-07 60.5 358 24.6
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.7e-07 60.5 335 24.5
Solyc08g006180.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.7e-07 60.5 156 32.1
Sopen08g002150 Solanum pennellii HOM05D000151 ORTHO05D000074 3.7e-07 60.5 96 38.5
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 3.7e-07 60.5 65 49.2
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 6.2e-07 59.7 302 23.8
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 6.2e-07 59.7 88 37.5
SGA_v2.0_scaffold205G41697 Striga asiatica HOM05D007685 ORTHO05D009136 6.2e-07 59.7 91 36.3
AUR62013850 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.1e-06 58.9 384 22.9
Ca_15450_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 1.1e-06 58.9 323 24.8
Peaxi162Scf00045g01536 Petunia axillaris HOM05D000151 ORTHO05D000074 1.1e-06 58.9 101 37.6
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-06 58.5 94 41.5
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-06 58.5 362 23.8
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-06 58.5 298 24.8
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-06 58.5 394 26.1
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 1.8e-06 58.2 252 26.2
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 57.8 347 23.9
CAN.G206.109 Capsicum annuum HOM05D000635 ORTHO05D000488 4.0e-06 57.0 170 24.7
Lj2C483T3 Lonicera japonica HOM05D000151 ORTHO05D000074 4.0e-06 57.0 172 28.5
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 5.3e-06 56.6 227 25.1
EL10Ac1g02048 Beta vulgaris HOM05D000151 ORTHO05D000074 6.9e-06 56.2 391 21.5
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 9.0e-06 55.8 343 23.9


User provided reference genes

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