Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 0.0e+00 2531.1 1303 100.0
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 0.0e+00 1468.4 1319 63.5
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 0.0e+00 1439.5 1307 61.4
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 0.0e+00 1141.7 1340 50.1
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 0.0e+00 1130.9 1325 50.2
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 0.0e+00 1123.6 1346 49.9
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 0.0e+00 1079.3 1351 47.7
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 6.5e-305 1051.2 1332 46.5
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 1.5e-304 1050.0 1341 47.0
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 9.4e-304 1047.3 1336 47.5
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.6e-303 1046.6 1336 47.8
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 8.0e-303 1044.3 1337 46.8
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 3.1e-299 1032.3 1325 46.8
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 2.7e-298 1029.2 1339 46.8
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 3.5e-298 1028.9 1324 45.8
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 7.7e-298 1027.7 1333 45.8
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.0e-297 1027.3 1202 50.1
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 9.5e-296 1020.8 1324 45.2
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 9.5e-296 1020.8 1327 46.9
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.7e-295 1019.2 1316 45.4
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 2.7e-295 1019.2 1202 49.8
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 8.0e-295 1017.7 1325 45.2
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 5.7e-293 1011.5 1338 45.1
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 6.3e-292 1008.1 1314 47.0
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.5e-290 1002.3 1324 44.8
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.1e-287 993.0 1202 48.8
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.5e-285 986.9 1347 44.4
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 5.4e-283 978.4 1324 44.0
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 3.9e-281 972.2 1311 46.0
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 3.9e-281 972.2 1340 46.3
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 8.9e-278 961.1 1335 43.8
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 3.4e-277 959.1 1194 48.6
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 2.2e-276 956.4 1294 45.4
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 2.9e-276 956.1 1364 44.0
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 3.7e-276 955.7 1335 44.0
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.1e-275 954.1 1300 44.3
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 5.4e-275 951.8 1275 45.7
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 4.6e-274 948.7 1327 43.0
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 7.8e-274 948.0 1346 43.9
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 4.3e-272 942.2 1349 43.0
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 1.4e-270 937.2 1412 42.1
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 7.5e-269 931.4 1325 43.3
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 3.7e-268 929.1 1334 43.4
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 8.3e-268 927.9 1207 46.8
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 1.9e-264 916.8 1333 43.2
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.3e-264 914.8 1323 43.4
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.2e-263 914.1 1273 43.8
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 2.6e-261 906.4 1415 41.3
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.4e-259 900.6 1205 46.1
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.9e-259 900.2 1321 42.9
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 3.0e-257 892.9 1323 41.8
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.1e-256 891.0 1290 43.9
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 2.6e-253 879.8 1303 42.7
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 7.6e-253 878.2 1230 43.7
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 2.9e-252 876.3 1315 41.4
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 2.3e-249 866.7 1322 40.9
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 2.3e-249 866.7 1322 40.9
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.1e-246 857.8 1251 43.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 1.4e-246 857.4 1289 42.3
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 3.1e-246 856.3 1334 41.0
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 4.5e-245 852.4 1316 40.9
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 2.4e-243 846.7 1318 40.4
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 7.1e-243 845.1 1332 40.4
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.0e-241 841.3 1322 40.2
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 6.7e-241 838.6 1334 41.6
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.1e-238 831.2 1343 40.1
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 2.4e-238 830.1 1158 43.1
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 2.4e-235 820.1 971 49.4
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 6.2e-231 805.4 1357 39.0
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.7e-226 790.0 1262 40.8
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 7.9e-218 761.9 1254 40.4
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 2.2e-212 743.8 1028 45.8
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 1.6e-210 737.6 1333 37.7
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.0e-209 734.9 1343 38.2
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.1e-198 698.4 1308 36.6
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 1.6e-194 684.5 965 43.1
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 3.2e-187 660.2 974 42.2
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 6.5e-180 636.0 1375 34.3
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 4.0e-169 600.1 1001 40.0
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 4.4e-168 596.7 1066 37.0
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.5e-163 581.6 1130 37.3
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 1.6e-157 561.6 778 43.4
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 8.6e-156 555.8 500 60.4
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.2e-154 552.0 606 52.8
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 4.7e-154 550.1 1079 35.8
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 6.8e-145 519.6 1318 32.2
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 9.9e-144 515.8 1269 31.7
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 2.6e-136 491.1 627 46.9
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 5.6e-131 473.4 688 42.9
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 2.0e-128 464.9 807 37.7
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 5.4e-126 456.8 894 34.2
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 4.2e-118 430.6 712 39.7
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 1.3e-114 419.1 598 43.3
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 1.6e-109 402.1 607 42.3
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 3.0e-108 397.9 629 40.9
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 9.0e-105 386.3 692 37.4
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 1.9e-99 368.6 541 42.0
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 1.8e-89 335.5 893 32.0
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 1.1e-86 326.2 357 52.9
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 3.6e-85 321.2 793 32.5
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 7.5e-75 287.0 277 57.4
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 5.0e-71 274.2 424 41.5
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 7.5e-67 260.4 260 56.5
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 6.6e-55 220.7 438 37.7
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 4.3e-54 218.0 175 66.9
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 4.1e-49 201.4 241 47.3
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.3e-47 196.4 219 48.9
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 3.0e-47 195.3 170 61.2
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 8.6e-47 193.7 169 62.1
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.7e-40 172.2 250 42.8
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 2.0e-35 156.0 364 30.8
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.9e-33 149.4 123 62.6
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.6e-32 146.4 363 34.2
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 8.6e-31 140.6 363 32.5
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 1.5e-30 139.8 125 64.8
CiPaw.11G106300 Carya illinoinensis HOM05D000087 ORTHO05D005735 1.6e-29 136.3 262 36.6
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.6e-29 135.2 174 46.0
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.4e-28 132.5 134 49.3
MD14G1142800 Malus domestica HOM05D000087 ORTHO05D005735 9.2e-25 120.6 252 33.3
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.3e-22 111.7 101 57.4
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 1.8e-20 106.3 1203 20.6
RcHm_v2.0_Chr7g0188121 Rosa chinensis HOM05D000087 ORTHO05D005735 6.9e-20 104.4 71 77.5
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 9.0e-20 104.0 95 50.5
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 8.4e-18 97.4 98 51.0
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 9.3e-17 94.0 68 67.6
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 9.3e-17 94.0 180 31.7
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.6e-16 93.2 121 46.3
VMungo1080G1218 Vigna mungo HOM05D000087 ORTHO05D005735 1.6e-16 93.2 105 49.5
SalBow1G5284 Salvia bowleyana HOM05D000087 ORTHO05D005735 4.6e-16 91.7 75 72.0
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 7.8e-16 90.9 95 52.6
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.3e-15 90.1 91 52.7
VMungo0145G0001 Vigna mungo HOM05D000087 ORTHO05D005735 6.6e-15 87.8 97 51.5
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 5.6e-14 84.7 91 48.4
VMungo1127G1440 Vigna mungo HOM05D000087 ORTHO05D005735 9.6e-14 84.0 161 34.8
SalBow7G0393 Salvia bowleyana HOM05D022560 ORTHO05D005735 1.6e-13 83.2 62 74.2
SalBow4G2543 Salvia bowleyana HOM05D003568 ORTHO05D004104 4.8e-13 81.6 62 67.7
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 3.1e-12 79.0 60 61.7
Duzib084G0615 Durio zibethinus HOM05D000087 ORTHO05D005735 9.0e-12 77.4 94 50.0
MBI04_g07085_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 4.9e-10 71.6 79 45.6
MBI04_g04802_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.1e-09 70.5 68 60.3
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 1.1e-09 70.5 71 47.9
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.4e-09 70.1 75 49.3
MBI04_g39794_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.4e-09 70.1 79 45.6
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 2.4e-09 69.3 95 41.1
Thecc.02G280700 Theobroma cacao HOM05D007305 ORTHO05D009886 3.2e-09 68.9 67 44.8
Gohir.D05G352126 Gossypium hirsutum HOM05D007305 ORTHO05D009886 4.2e-09 68.6 64 51.6
Gorai.009G383800 Gossypium raimondii HOM05D007305 ORTHO05D009886 4.2e-09 68.6 64 51.6
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 5.4e-09 68.2 70 48.6
Thecc.04G308500 Theobroma cacao HOM05D007305 ORTHO05D009886 9.3e-09 67.4 68 44.1
Gohir.A04G032550 Gossypium hirsutum HOM05D007305 ORTHO05D009886 1.2e-08 67.0 64 50.0
CARHR046160 Cardamine hirsuta HOM05D000087 ORTHO05D005735 6.0e-08 64.7 62 48.4
Gohir.A05G322708 Gossypium hirsutum HOM05D007305 ORTHO05D009886 7.9e-08 64.3 68 45.6
Gorai.009G450700 Gossypium raimondii HOM05D007305 ORTHO05D009886 7.9e-08 64.3 60 51.7
Thecc.07G142000 Theobroma cacao HOM05D007305 ORTHO05D009886 7.9e-08 64.3 68 42.6
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 1.0e-07 63.9 71 43.7
Ah.10g034360 Amaranthus hybridus HOM05D000087 ORTHO05D005735 1.3e-07 63.5 72 50.0
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 1.8e-07 63.2 71 46.5
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 1.8e-07 63.2 71 45.1
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.8e-07 63.2 180 32.8
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 3.0e-07 62.4 66 51.5
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 3.9e-07 62.0 60 50.0
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 3.9e-07 62.0 95 42.1
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 5.1e-07 61.6 60 48.3
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 5.1e-07 61.6 95 42.1
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 5.1e-07 61.6 95 42.1
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 8.7e-07 60.8 50 52.0
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.1e-06 60.5 95 42.1
Cc04_g16800 Coffea canephora HOM05D007305 ORTHO05D009886 1.9e-06 59.7 50 52.0
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 3.3e-06 58.9 95 41.1
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 5.6e-06 58.2 39 64.1


User provided reference genes

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