Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold123G33416 Striga asiatica HOM05D031718 ORTHO05D401514 8.2e-70 266.9 134 100.0
SGA_v2.0_scaffold159G37691 Striga asiatica HOM05D003710 ORTHO05D005250 2.0e-15 86.3 48 87.5
SGA_v2.0_scaffold24G10381 Striga asiatica HOM05D031718 ORTHO05D404593 6.8e-08 61.2 34 88.2
SalBow7G1351 Salvia bowleyana HOM05D003710 ORTHO05D005250 8.9e-08 60.8 50 54.0
SalBow7G2176 Salvia bowleyana HOM05D003710 ORTHO05D005250 8.9e-08 60.8 50 54.0
SGA_v2.0_scaffold29G12205 Striga asiatica HOM05D060588 ORTHO05D400286 7.6e-07 57.8 74 50.0
Oeu014712.1 Olea europaea HOM05D003710 ORTHO05D005250 9.9e-07 57.4 55 47.3
Migut.H01519 Erythranthe guttata HOM05D003710 ORTHO05D005250 1.3e-06 57.0 55 43.6
HanXRQChr16g0517601 Helianthus annuus HOM05D003710 ORTHO05D005250 1.7e-06 56.6 56 50.0
CSS0031757 Camellia sinensis var. sinensis HOM05D003710 ORTHO05D005250 2.2e-06 56.2 50 56.0
Ca_18478_v3 Cicer arietinum L. HOM05D003710 ORTHO05D005250 2.9e-06 55.8 50 46.0
Glyma.13G246700 Glycine max HOM05D003710 ORTHO05D005250 2.9e-06 55.8 48 50.0
Glyma.15G067200 Glycine max HOM05D003710 ORTHO05D005250 2.9e-06 55.8 48 50.0
VMungo0540G1761 Vigna mungo HOM05D003710 ORTHO05D005250 2.9e-06 55.8 48 50.0
MSTRG.14675 Avicennia marina HOM05D003710 ORTHO05D005250 3.8e-06 55.5 48 56.2
ClCG03G005500 Citrullus lanatus HOM05D003710 ORTHO05D005250 3.8e-06 55.5 57 42.1
Nitab4.5_0000190g0040 Nicotiana tabacum HOM05D003710 ORTHO05D005250 3.8e-06 55.5 50 52.0
Rhsim02G0119400 Rhododendron simsii HOM05D003710 ORTHO05D005250 4.9e-06 55.1 50 46.0
TPR.G15384 Trifolium pratense HOM05D003710 ORTHO05D005250 4.9e-06 55.1 48 47.9
Atru.chr10.2018 Acer truncatum HOM05D003710 ORTHO05D005250 6.4e-06 54.7 50 44.0
Lj4g0027727 Lotus japonicus HOM05D003710 ORTHO05D005250 6.4e-06 54.7 48 45.8
Manes.16G020200 Manihot esculenta HOM05D003710 ORTHO05D005250 6.4e-06 54.7 48 52.1
Medtr4g091320 Medicago truncatula HOM05D003710 ORTHO05D005250 6.4e-06 54.7 50 44.0
Nitab4.5_0008791g0010 Nicotiana tabacum HOM05D003710 ORTHO05D005250 6.4e-06 54.7 50 50.0
Phvul.006G192500 Phaseolus vulgaris HOM05D003710 ORTHO05D005250 6.4e-06 54.7 48 47.9
Manes.17G033200 Manihot esculenta HOM05D003710 ORTHO05D005250 8.4e-06 54.3 48 52.1
PGR004G0177 Punica granatum HOM05D003710 ORTHO05D005250 8.4e-06 54.3 55 45.5
Sp1g09920 Schrenkiella parvula HOM05D003710 ORTHO05D005250 8.4e-06 54.3 67 38.8


User provided reference genes

Program Settings