Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 0.0e+00 1100.5 541 100.0
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 1.4e-237 826.2 594 75.3
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-105 387.9 299 69.9
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-54 217.6 469 34.8
SGA_v2.0_scaffold62G21622 Striga asiatica HOM05D031284 ORTHO05D009014 8.5e-41 172.6 92 92.4
SGA_v2.0_scaffold92G28297 Striga asiatica HOM05D031284 ORTHO05D009014 1.8e-22 111.7 155 46.5
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.6e-21 107.8 278 25.9
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-20 105.1 331 25.1
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 4.1e-19 100.5 297 24.9
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-18 98.6 435 22.5
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-18 97.4 180 28.9
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-17 95.5 92 40.2
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-17 94.0 308 23.7
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-17 94.0 308 23.7
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-16 89.4 307 24.8
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 6.1e-15 86.7 92 42.4
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 8.9e-14 82.8 92 38.0
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-13 82.4 273 24.2
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-12 78.6 355 22.8
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 4.9e-12 77.0 283 22.3
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 8.3e-12 76.3 83 43.4
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-11 75.9 109 34.9
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 9.2e-11 72.8 171 27.5
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-10 72.4 244 22.5
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-10 72.0 259 22.8
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 2.7e-10 71.2 95 36.8
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-10 71.2 328 21.3
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-10 71.2 260 25.4
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-10 70.5 259 22.4
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-10 70.1 387 21.7
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-10 69.7 281 21.4
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-10 69.7 90 32.2
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-09 68.6 259 22.4
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 3.9e-09 67.4 281 22.8
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-09 67.0 48 50.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 65.9 276 21.0
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-08 63.9 159 28.3
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-07 62.4 175 26.3
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-07 60.1 91 30.8
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-06 57.8 234 23.1
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-06 57.8 259 20.8
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-06 57.4 192 25.0


User provided reference genes

Program Settings