Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 2.6e-225 785.0 389 100.0
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 1.0e-128 464.2 353 70.8
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 4.0e-125 452.2 345 69.3
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.2e-124 450.7 369 66.7
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 9.6e-119 431.0 361 65.7
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 3.1e-117 426.0 345 67.0
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 3.4e-116 422.5 340 66.2
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 7.6e-116 421.4 345 66.4
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 4.9e-115 418.7 346 64.7
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 6.4e-115 418.3 345 64.9
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.4e-114 416.4 345 65.2
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 3.5e-113 412.5 382 60.5
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 4.6e-113 412.1 351 64.1
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 4.6e-113 412.1 380 61.6
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 1.7e-112 410.2 280 75.4
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 2.3e-112 409.8 345 63.5
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 3.0e-112 409.5 345 63.8
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 1.9e-111 406.8 335 63.9
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 9.6e-111 404.4 344 64.2
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 1.6e-110 403.7 345 62.3
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.6e-110 403.7 378 60.6
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 3.6e-110 402.5 334 63.8
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 6.2e-110 401.7 345 63.8
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 6.2e-110 401.7 345 63.8
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 6.2e-110 401.7 343 63.8
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 6.2e-110 401.7 365 59.7
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 1.4e-109 400.6 332 64.8
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.8e-109 400.2 345 63.5
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 1.8e-109 400.2 345 60.9
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 3.1e-109 399.4 280 72.5
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 3.1e-109 399.4 353 62.0
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 3.1e-109 399.4 355 61.1
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 4.0e-109 399.1 325 65.8
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 4.0e-109 399.1 329 63.5
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 9.0e-109 397.9 332 64.2
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 2.0e-108 396.7 279 71.3
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 2.6e-108 396.4 280 71.1
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 3.4e-108 396.0 342 60.5
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 4.4e-108 395.6 280 72.1
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 5.8e-108 395.2 344 61.6
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 1.3e-107 394.0 345 61.7
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 1.3e-107 394.0 345 61.2
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 1.3e-107 394.0 280 71.8
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 1.7e-107 393.7 345 62.3
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 1.7e-107 393.7 271 73.4
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.7e-107 393.7 345 62.9
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 2.9e-107 392.9 270 74.1
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 2.9e-107 392.9 345 62.0
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 3.8e-107 392.5 328 62.5
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 8.4e-107 391.3 345 61.7
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 1.4e-106 390.6 270 74.1
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 2.4e-106 389.8 345 59.4
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 3.2e-106 389.4 345 60.6
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 3.2e-106 389.4 280 71.1
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 4.2e-106 389.0 345 61.4
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 4.2e-106 389.0 325 63.7
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 4.2e-106 389.0 280 71.1
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 9.3e-106 387.9 344 61.9
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 1.2e-105 387.5 345 61.4
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.6e-105 387.1 328 62.2
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.6e-105 387.1 345 60.3
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.1e-105 386.7 325 63.1
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 2.1e-105 386.7 359 59.3
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 2.7e-105 386.3 349 60.2
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 2.7e-105 386.3 345 60.3
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 3.5e-105 386.0 280 70.0
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 4.6e-105 385.6 330 62.4
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 4.6e-105 385.6 280 70.0
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 7.8e-105 384.8 326 62.0
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 1.3e-104 384.0 345 60.3
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 1.7e-104 383.6 282 71.6
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 2.3e-104 383.3 279 69.9
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 3.0e-104 382.9 334 61.4
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 6.6e-104 381.7 335 60.9
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 1.9e-103 380.2 344 59.9
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 3.3e-103 379.4 271 70.8
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 7.3e-103 378.3 347 59.1
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 9.6e-103 377.9 280 68.9
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 1.6e-102 377.1 280 66.8
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 3.6e-102 375.9 280 68.2
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 3.6e-102 375.9 280 68.2
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 4.8e-102 375.6 270 71.1
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 3.1e-101 372.9 280 66.1
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 4.0e-101 372.5 338 58.9
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 4.0e-101 372.5 280 68.2
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 5.3e-101 372.1 365 56.4
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.6e-100 369.8 339 61.7
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 1.3e-99 367.5 280 66.1
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 2.2e-99 366.7 280 68.2
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 2.9e-99 366.3 346 57.2
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 4.9e-99 365.5 265 69.8
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 5.4e-98 362.1 277 65.3
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 7.1e-98 361.7 280 65.0
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 1.6e-97 360.5 280 64.6
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 2.7e-97 359.8 280 64.6
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 7.9e-97 358.2 274 69.0
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 2.3e-96 356.7 341 57.8
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 3.3e-95 352.8 280 63.6
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 1.6e-94 350.5 281 63.7
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 6.9e-93 345.1 280 62.9
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 1.2e-92 344.4 281 62.6
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 1.2e-92 344.4 281 62.6
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 1.5e-92 344.0 281 63.0
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 2.0e-92 343.6 280 61.8
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 5.8e-92 342.0 281 62.6
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 1.3e-91 340.9 281 61.9
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 2.2e-91 340.1 281 61.9
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 6.5e-91 338.6 280 61.4
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 1.1e-90 337.8 361 49.9
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 3.2e-90 336.3 344 56.7
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 5.3e-85 318.9 281 59.4
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 3.4e-84 316.2 206 74.8
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 2.7e-81 306.6 280 60.4
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 1.0e-80 304.7 246 67.5
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 3.9e-80 302.8 191 80.1
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 9.4e-74 281.6 280 51.8
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.7e-70 270.8 186 71.0
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 1.7e-70 270.8 207 66.2
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 2.7e-65 253.4 256 55.9
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 1.5e-60 237.7 243 56.8
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 1.5e-58 231.1 301 43.5
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-52 210.7 139 75.5
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 9.4e-50 201.8 162 68.5
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-46 191.0 165 61.2
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 8.5e-43 178.7 112 80.4
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 2.3e-40 170.6 279 39.8
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 8.8e-40 168.7 281 37.4
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 8.8e-40 168.7 117 65.8
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 1.5e-39 167.9 174 58.0
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 4.5e-36 156.4 100 78.0
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 5.9e-36 156.0 195 49.7
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 4.7e-33 146.4 91 76.9
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 3.2e-29 133.7 79 79.7
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 2.3e-24 117.5 77 77.9
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 3.7e-22 110.2 72 77.8
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 9.2e-21 105.5 67 76.1
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 1.7e-19 101.3 85 60.0
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 4.1e-13 80.1 82 56.1
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 3.9e-11 73.6 55 67.3
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-08 64.7 101 40.6


User provided reference genes

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