Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 7.8e-135 483.8 245 100.0
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 4.2e-104 381.7 270 77.4
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 2.2e-76 289.7 227 71.8
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 1.1e-75 287.3 253 66.0
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 4.2e-64 248.8 251 60.6
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 2.8e-60 236.1 253 54.9
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 1.1e-51 207.6 272 47.8
SGA_v2.0_scaffold7G03723 Striga asiatica HOM05D002727 ORTHO05D002856 7.8e-50 201.4 105 95.2
SGA_v2.0_scaffold190G40405 Striga asiatica HOM05D002727 ORTHO05D002856 3.6e-47 192.6 109 90.8
SGA_v2.0_scaffold52G19078 Striga asiatica HOM05D002727 ORTHO05D002856 8.9e-46 188.0 119 86.6
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 1.8e-38 163.7 201 46.8
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 2.3e-38 163.3 266 42.1
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 4.0e-38 162.5 265 41.1
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 2.2e-36 156.8 266 40.2
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 2.7e-34 149.8 256 41.4
SGA_v2.0_scaffold495G52461 Striga asiatica HOM05D002727 ORTHO05D002856 3.5e-34 149.4 94 84.0
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 1.6e-31 140.6 272 39.0
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 2.2e-28 130.2 82 84.1
SGA_v2.0_scaffold44G16740 Striga asiatica HOM05D002727 ORTHO05D002856 7.1e-27 125.2 73 90.4
SGA_v2.0_scaffold85G26696 Striga asiatica HOM05D002727 ORTHO05D002856 2.7e-26 123.2 93 77.4
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.0e-25 121.3 207 37.7
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.0e-25 121.3 207 37.7
SGA_v2.0_scaffold76G25158 Striga asiatica HOM05D002727 ORTHO05D002856 1.0e-25 121.3 73 89.0
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 6.6e-25 118.6 216 35.2
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 6.6e-25 118.6 199 37.2
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 8.6e-25 118.2 216 35.6
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 4.3e-24 115.9 167 44.9
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 9.5e-24 114.8 201 36.8
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 4.7e-23 112.5 202 35.6
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 8.9e-22 108.2 264 30.7
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 1.5e-21 107.5 201 33.8
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 2.0e-21 107.1 207 32.9
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 2.0e-21 107.1 223 34.5
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 5.8e-21 105.5 206 34.5
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 9.9e-21 104.8 265 29.1
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 1.3e-20 104.4 233 33.0
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 1.7e-20 104.0 199 33.7
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 3.8e-20 102.8 202 32.7
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 4.9e-20 102.4 209 32.5
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 4.9e-20 102.4 264 31.1
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 6.4e-20 102.1 204 31.4
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 6.4e-20 102.1 199 32.7
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 6.4e-20 102.1 200 31.0
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 1.1e-19 101.3 204 30.4
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 1.1e-19 101.3 200 33.5
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 1.4e-19 100.9 207 33.8
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 1.4e-19 100.9 199 33.7
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 1.9e-19 100.5 201 32.8
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 1.9e-19 100.5 207 33.8
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 2.4e-19 100.1 230 30.4
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 2.4e-19 100.1 205 31.7
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 3.2e-19 99.8 204 31.4
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 5.4e-19 99.0 222 28.8
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 7.1e-19 98.6 205 32.7
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 7.1e-19 98.6 203 32.5
Ciclev10017720m.g Citrus clementina HOM05D002727 ORTHO05D002856 9.2e-19 98.2 221 31.2
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 9.2e-19 98.2 250 28.8
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 1.2e-18 97.8 200 31.5
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 1.6e-18 97.4 205 31.7
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 2.1e-18 97.1 202 33.2
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 3.5e-18 96.3 270 30.4
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 6.0e-18 95.5 264 29.5
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 7.8e-18 95.1 234 30.8
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 7.8e-18 95.1 203 33.0
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.0e-17 94.7 231 28.6
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.0e-17 94.7 214 30.8
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 1.3e-17 94.4 201 31.3
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 1.7e-17 94.0 209 33.0
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 1.7e-17 94.0 201 30.8
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.3e-17 93.6 210 31.9
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.0e-17 93.2 210 32.4
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.0e-17 93.2 231 29.0
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 3.9e-17 92.8 210 32.9
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 3.9e-17 92.8 204 32.4
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 3.9e-17 92.8 231 28.6
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.9e-17 92.8 231 28.6
TPR.G24442 Trifolium pratense HOM05D002727 ORTHO05D002856 3.9e-17 92.8 214 29.0
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.1e-17 92.4 231 27.7
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 6.6e-17 92.0 214 30.8
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-16 91.3 210 31.4
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.9e-16 90.5 209 31.1
Sabra08G0096300 Salix brachista HOM05D002727 ORTHO05D002856 2.5e-16 90.1 254 27.6
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 4.3e-16 89.4 212 33.0
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 5.6e-16 89.0 200 32.0
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 7.3e-16 88.6 213 31.5
Ca_24568_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.2e-15 87.8 216 28.2
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 1.2e-15 87.8 233 28.8
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 1.2e-15 87.8 210 31.0
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 1.2e-15 87.8 199 29.1
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 1.2e-15 87.8 189 33.3
Psat2g129760 Pisum sativum HOM05D002727 ORTHO05D002856 1.6e-15 87.4 215 29.3
AUR62039553 Chenopodium quinoa HOM05D002727 ORTHO05D002856 2.1e-15 87.0 214 29.9
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.1e-15 87.0 222 29.3
Glyma.09G119800 Glycine max HOM05D002727 ORTHO05D002856 2.1e-15 87.0 198 32.3
THA.LOC104824147 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 2.1e-15 87.0 202 28.7
Prupe.1G322000 Prunus persica HOM05D002727 ORTHO05D002856 2.8e-15 86.7 280 27.1
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.6e-15 86.3 211 30.3
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 3.6e-15 86.3 200 29.5
Eucgr.G02206 Eucalyptus grandis HOM05D002727 ORTHO05D002856 4.7e-15 85.9 195 28.7
Potri.008G127500 Populus trichocarpa HOM05D002727 ORTHO05D002856 6.2e-15 85.5 187 29.4
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.1e-15 85.1 208 30.3
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 8.1e-15 85.1 204 30.9
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 1.1e-14 84.7 208 30.3
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.4e-14 84.3 274 29.9
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.4e-14 84.3 208 29.8
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 3.1e-14 83.2 203 28.1
Eucgr.G02210 Eucalyptus grandis HOM05D002727 ORTHO05D002856 3.1e-14 83.2 208 28.8
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 4.0e-14 82.8 209 28.2
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 4.0e-14 82.8 233 27.5
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 4.0e-14 82.8 217 26.7
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 6.9e-14 82.0 205 26.3
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 6.9e-14 82.0 207 28.5
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 1.2e-13 81.3 222 27.9
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 1.5e-13 80.9 197 29.4
Lj2g0009169 Lotus japonicus HOM05D002727 ORTHO05D002856 2.0e-13 80.5 210 28.6
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 9.9e-13 78.2 200 28.0
unitig_26.g9074 Utricularia gibba HOM05D002727 ORTHO05D002856 9.9e-13 78.2 80 55.0
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 1.3e-12 77.8 187 34.2
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 1.3e-12 77.8 198 29.3
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 1.7e-12 77.4 258 24.8
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 1.7e-12 77.4 209 27.3
arahy.Tifrunner.gnm1.ann1.L56H08 Arachis hypogaea HOM05D002727 ORTHO05D002856 2.9e-12 76.6 233 27.9
arahy.Tifrunner.gnm1.ann1.AV0RHQ Arachis hypogaea HOM05D002727 ORTHO05D002856 4.9e-12 75.9 235 26.4
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 4.9e-12 75.9 190 26.3
SGA_v2.0_scaffold10G05490 Striga asiatica HOM05D002727 ORTHO05D002856 4.9e-12 75.9 51 86.3
arahy.Tifrunner.gnm1.ann1.PT8N4B Arachis hypogaea HOM05D002727 ORTHO05D002856 6.4e-12 75.5 235 26.4
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 6.4e-12 75.5 227 27.8
PSO017G6820 Papaver somniferum HOM05D002727 ORTHO05D002856 1.4e-11 74.3 187 33.7
PSO478G1097 Papaver somniferum HOM05D002727 ORTHO05D002856 1.4e-11 74.3 187 33.7
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 3.2e-11 73.2 211 31.3
arahy.Tifrunner.gnm1.ann1.A4HJXM Arachis hypogaea HOM05D002727 ORTHO05D002856 3.2e-11 73.2 233 27.0
Manes.14G135600 Manihot esculenta HOM05D002727 ORTHO05D002856 4.2e-11 72.8 202 29.2
unitig_26.g9076 Utricularia gibba HOM05D002727 ORTHO05D002856 4.2e-11 72.8 89 49.4
PSO017G4651 Papaver somniferum HOM05D002727 ORTHO05D002856 7.1e-11 72.0 194 28.4
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 7.1e-11 72.0 82 47.6
Sc18g0004340 Simmondsia chinensis HOM05D002727 ORTHO05D002856 1.2e-10 71.2 205 29.3
PSO478G0105 Papaver somniferum HOM05D002727 ORTHO05D002856 2.1e-10 70.5 193 28.0
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 3.5e-10 69.7 214 24.8
Lalb_Chr24g0403301 Lupinus albus HOM05D002727 ORTHO05D002856 7.8e-10 68.6 185 30.3
FvH4_6g53540 Fragaria vesca HOM05D002727 ORTHO05D002856 1.0e-09 68.2 200 29.0
AUR62014130 Chenopodium quinoa HOM05D002727 ORTHO05D002856 1.7e-09 67.4 157 28.0
Medtr4g084160 Medicago truncatula HOM05D002727 ORTHO05D002856 2.3e-09 67.0 181 31.5
Prupe.3G306500 Prunus persica HOM05D002727 ORTHO05D002856 2.3e-09 67.0 234 28.6
MD09G1010600 Malus domestica HOM05D002727 ORTHO05D002856 3.9e-09 66.2 235 27.7
FAN14G5438 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.7e-09 65.1 200 29.0
Manes.17G103100 Manihot esculenta HOM05D002727 ORTHO05D002856 8.7e-09 65.1 205 26.3
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 1.1e-08 64.7 209 27.3
FAN05G4306 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.5e-08 64.3 200 29.0
RcHm_v2.0_Chr2g0175581 Rosa chinensis HOM05D002727 ORTHO05D002856 1.9e-08 63.9 200 28.0
CANSAT64G1895 Cannabis sativa HOM05D002727 ORTHO05D002856 2.5e-08 63.5 197 29.9
BcaC02g08989 Brassica carinata HOM05D002727 ORTHO05D002856 5.6e-08 62.4 223 25.6
Cpa.g.sc65.122 Carica papaya HOM05D002727 ORTHO05D002856 7.3e-08 62.0 211 28.0
C04p48030 Brassica napus HOM05D002727 ORTHO05D002856 1.3e-07 61.2 222 26.1
BolC4t26395H Brassica oleracea HOM05D002727 ORTHO05D002856 1.3e-07 61.2 222 26.1
A04p14000 Brassica napus HOM05D002727 ORTHO05D002856 4.8e-07 59.3 220 24.1
Oeu019229.1 Olea europaea HOM05D034535 ORTHO05D002856 6.2e-07 58.9 54 51.9
FAN06G1995 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-06 58.2 125 34.4
Ca_24293_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.4e-06 57.8 187 26.7
BcaB06g27576 Brassica carinata HOM05D002727 ORTHO05D002856 1.8e-06 57.4 222 24.8
Atru.chr11.406 Acer truncatum HOM05D002727 ORTHO05D002856 2.4e-06 57.0 101 36.6
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 2.4e-06 57.0 139 28.8
CiPaw.05G247600 Carya illinoinensis HOM05D002727 ORTHO05D002856 3.1e-06 56.6 126 33.3
Aa31LG1G13580 Aethionema arabicum HOM05D002727 ORTHO05D002856 6.9e-06 55.5 237 26.2
Sabra17G0092700 Salix brachista HOM05D002727 ORTHO05D002856 6.9e-06 55.5 210 24.3


User provided reference genes

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