Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 0.0e+00 1122.5 548 100.0
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 4.2e-221 771.5 531 71.0
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.7e-217 759.6 537 69.6
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 2.6e-207 725.7 525 68.0
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 2.9e-190 669.1 552 60.9
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 4.4e-186 655.2 518 62.9
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 1.7e-185 653.3 528 61.0
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.4e-184 650.2 545 59.4
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 1.7e-182 643.3 531 61.8
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 6.6e-182 641.3 504 62.1
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 6.8e-179 631.3 504 61.7
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 6.8e-179 631.3 504 61.3
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 3.4e-178 629.0 539 60.1
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 7.5e-178 627.9 544 59.9
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 1.7e-177 626.7 443 68.8
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.7e-177 626.7 544 59.7
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 2.8e-177 625.9 540 58.9
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 3.7e-177 625.5 556 57.0
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 3.7e-177 625.5 547 59.0
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 4.9e-177 625.2 486 63.8
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 6.3e-177 624.8 503 61.8
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 8.3e-177 624.4 543 57.8
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 8.3e-177 624.4 532 59.2
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 1.8e-176 623.2 510 60.0
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 3.2e-176 622.5 503 62.0
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 9.2e-176 620.9 495 61.6
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 9.2e-176 620.9 495 61.6
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 1.7e-174 616.7 515 60.6
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.3e-174 616.3 501 61.9
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 6.6e-174 614.8 510 58.4
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 8.6e-174 614.4 503 61.6
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.9e-173 613.2 543 57.8
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 9.5e-173 610.9 502 61.2
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 1.4e-171 607.1 517 58.2
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 5.2e-171 605.1 514 59.3
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 5.2e-171 605.1 499 61.9
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 8.9e-171 604.4 547 57.6
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 8.9e-171 604.4 485 62.7
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 1.2e-170 604.0 529 58.2
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 2.6e-170 602.8 488 60.5
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 4.4e-170 602.1 513 59.5
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 5.8e-170 601.7 546 57.0
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 7.5e-170 601.3 505 59.2
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 7.5e-170 601.3 504 59.3
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 9.8e-170 600.9 504 58.3
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 9.8e-170 600.9 490 60.2
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 2.2e-169 599.7 533 57.8
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 4.9e-169 598.6 490 60.4
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 7.0e-168 594.7 551 55.9
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 2.0e-167 593.2 444 65.5
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 3.5e-167 592.4 499 59.5
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 6.0e-167 591.7 504 57.7
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 7.8e-167 591.3 445 64.7
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 1.0e-166 590.9 522 56.9
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 3.9e-166 589.0 388 72.2
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 1.5e-165 587.0 521 57.8
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.9e-165 586.6 550 54.4
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 1.6e-164 583.6 540 55.2
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 6.2e-164 581.6 480 59.2
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.8e-163 580.1 528 56.1
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 3.1e-163 579.3 549 54.3
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 3.1e-163 579.3 549 55.2
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 6.8e-163 578.2 388 70.9
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 2.0e-162 576.6 519 55.9
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 5.8e-162 575.1 528 56.1
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 5.8e-162 575.1 548 53.6
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 2.2e-161 573.2 484 58.9
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 2.2e-161 573.2 545 54.5
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 3.7e-161 572.4 539 54.2
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 1.1e-160 570.9 528 55.9
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 1.4e-160 570.5 548 53.5
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 1.2e-159 567.4 512 56.1
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 2.1e-159 566.6 501 56.1
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 7.8e-159 564.7 545 54.5
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.0e-158 564.3 532 55.6
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.0e-158 562.8 494 57.1
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 6.6e-158 561.6 545 54.1
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 1.1e-157 560.8 545 53.0
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 7.3e-157 558.1 540 54.6
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 8.1e-156 554.7 545 54.1
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.0e-155 552.4 554 51.8
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 5.2e-155 552.0 438 61.6
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 2.3e-150 536.6 464 56.2
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 3.0e-150 536.2 536 52.8
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 6.6e-150 535.0 394 66.0
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 6.6e-150 535.0 394 66.0
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.6e-146 523.1 455 59.3
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.1e-144 517.7 534 51.5
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 3.2e-144 516.2 403 61.8
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 2.3e-142 510.0 388 64.2
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 3.1e-139 499.6 540 49.3
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.0e-138 496.9 442 56.1
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 1.3e-137 494.2 390 62.6
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 3.3e-133 479.6 482 50.0
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 9.6e-133 478.0 399 59.9
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 2.1e-132 476.9 441 52.6
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 5.8e-130 468.8 503 50.1
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 5.8e-130 468.8 427 56.0
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 3.2e-128 463.0 516 49.4
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 9.6e-125 451.4 476 49.6
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 3.7e-124 449.5 462 49.4
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 1.3e-121 441.0 399 57.6
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 1.4e-120 437.6 474 47.7
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 2.1e-119 433.7 334 65.0
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 1.9e-117 427.2 340 61.2
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 8.2e-116 421.8 351 60.7
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 5.9e-114 415.6 360 56.9
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.3e-109 399.8 473 46.1
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.8e-107 394.0 381 52.2
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 6.5e-105 385.6 306 60.8
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 5.7e-101 372.5 345 54.8
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 9.7e-101 371.7 278 66.2
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 2.6e-98 363.6 451 42.1
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.7e-97 360.9 258 67.8
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.6e-90 337.8 512 40.6
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 1.4e-86 324.7 304 53.3
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 4.5e-82 309.7 276 54.7
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 5.9e-82 309.3 395 43.5
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.4e-75 286.2 535 35.9
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.3e-73 281.6 241 61.0
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 9.2e-67 258.8 194 59.8
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 2.0e-53 214.5 159 64.2
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 4.9e-44 183.3 195 47.2
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 3.2e-43 180.6 132 62.9
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 4.4e-37 160.2 124 62.1
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 4.1e-35 153.7 126 63.5
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.2e-34 152.1 126 62.7
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 1.1e-30 139.0 145 51.7
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 1.9e-27 128.3 116 56.9
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 2.7e-26 124.4 154 44.2
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 6.0e-26 123.2 112 56.2
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 1.9e-19 101.7 122 47.5
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 1.2e-18 99.0 101 52.5
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 2.5e-16 91.3 102 46.1
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 1.1e-14 85.9 94 47.9
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 7.6e-13 79.7 125 38.4
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 9.3e-11 72.8 69 50.7


User provided reference genes

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