Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 2.7e-52 208.4 105 100.0
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 5.7e-50 200.7 105 97.1
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 6.5e-46 187.2 106 93.4
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 2.5e-45 185.3 106 92.5
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-40 169.1 106 87.7
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.2e-36 156.4 105 78.1
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 3.8e-30 134.8 101 68.3
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 2.5e-29 132.1 102 67.6
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 1.4e-19 99.8 86 62.8
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 2.3e-19 99.0 102 53.9
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 1.5e-18 96.3 101 54.5
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 2.7e-15 85.5 94 50.0
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.0e-14 81.3 81 54.3
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 5.0e-14 81.3 72 56.9
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 2.5e-13 79.0 89 49.4
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 4.2e-13 78.2 68 58.8
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.5e-13 77.8 70 60.0
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.2e-12 76.6 70 60.0
SGA_v2.0_scaffold186G40148 Striga asiatica HOM05D008620 ORTHO05D011304 8.3e-09 63.9 86 46.5
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 3.1e-08 62.0 64 53.1
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 7.0e-08 60.8 79 48.1
SalBow5G0621 Salvia bowleyana HOM05D008620 ORTHO05D011304 9.2e-08 60.5 45 64.4
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 1.3e-06 56.6 68 51.5
Lsat_1_v5_gn_8_115540 Lactuca sativa HOM05D008620 ORTHO05D011304 1.7e-06 56.2 64 51.6
MBI12_g22442_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 5.0e-06 54.7 61 52.5


User provided reference genes

Program Settings