Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33145 Striga asiatica HOM05D010876 ORTHO05D011353 5.8e-135 484.2 238 100.0
SGA_v2.0_scaffold121G33150 Striga asiatica HOM05D010876 ORTHO05D011353 7.4e-106 387.5 197 97.0
SGA_v2.0_scaffold121G33133 Striga asiatica HOM05D010876 ORTHO05D011353 2.8e-97 359.0 182 96.7
FAN19G0678 Fragaria x ananassa HOM05D010876 ORTHO05D011353 4.2e-32 142.5 197 48.7
SGA_v2.0_scaffold49G18106 Striga asiatica HOM05D010876 ORTHO05D011353 9.9e-26 121.3 82 76.8
FAN26G1411 Fragaria x ananassa HOM05D017562 ORTHO05D011353 2.7e-15 86.7 198 38.4
Os02g0269400 Oryza sativa ssp. japonica HOM05D022356 ORTHO05D011353 1.0e-14 84.7 202 37.1
CiPaw.01G017100 Carya illinoinensis HOM05D017562 ORTHO05D011353 5.1e-14 82.4 109 47.7
ATR0083G050 Amborella trichopoda HOM05D022356 ORTHO05D011353 4.8e-12 75.9 131 36.6
MBI12_g36692_MAGBIO Magnolia biondii HOM05D010876 ORTHO05D011353 8.1e-12 75.1 142 39.4
FAN26G2682 Fragaria x ananassa HOM05D017562 ORTHO05D011353 1.5e-10 70.9 78 53.8
FAN19G2145 Fragaria x ananassa HOM05D017562 ORTHO05D011353 7.6e-10 68.6 78 52.6
FAN28G0790 Fragaria x ananassa HOM05D017562 ORTHO05D011353 2.9e-09 66.6 78 52.6
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 3.2e-08 63.2 52 63.5
MBI16_g14967_MAGBIO Magnolia biondii HOM05D010876 ORTHO05D011353 3.2e-08 63.2 64 57.8
Os01g0794900 Oryza sativa ssp. japonica HOM05D022356 ORTHO05D011353 4.2e-08 62.8 115 40.0
SGA_v2.0_scaffold262G45939 Striga asiatica HOM05D010876 ORTHO05D011353 4.2e-08 62.8 92 45.7
FAN05G5336 Fragaria x ananassa HOM05D017562 ORTHO05D011353 1.6e-07 60.8 83 49.4
FAN26G1939 Fragaria x ananassa HOM05D008620 ORTHO05D017975 1.6e-07 60.8 59 57.6
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 2.7e-07 60.1 49 61.2
MBI12_g22442_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 7.9e-07 58.5 42 64.3
Os02g0270350 Oryza sativa ssp. japonica HOM05D022356 ORTHO05D011353 1.0e-06 58.2 80 41.2
FAN05G4038 Fragaria x ananassa HOM05D017562 ORTHO05D011353 2.3e-06 57.0 69 44.9
Nitab4.5_0001816g0040 Nicotiana tabacum HOM05D016397 ORTHO05D011353 2.3e-06 57.0 87 42.5
Os04g0182400 Oryza sativa ssp. japonica HOM05D010876 ORTHO05D011353 6.7e-06 55.5 166 34.3


User provided reference genes

Program Settings