Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 6.2e-55 217.2 111 100.0
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 4.6e-50 201.1 106 97.2
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 7.8e-50 200.3 111 94.6
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 3.1e-46 188.3 106 93.4
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 4.4e-45 184.5 106 92.5
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.6e-39 166.0 110 79.1
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 4.2e-35 151.4 107 72.9
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 8.1e-31 137.1 103 68.9
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 5.8e-21 104.4 107 57.0
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 1.3e-20 103.2 86 62.8
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 1.7e-20 102.8 103 56.3
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 7.9e-18 94.0 106 49.1
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 8.7e-17 90.5 86 54.7
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.3e-15 86.7 68 64.7
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 2.8e-15 85.5 68 64.7
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 1.1e-14 83.6 94 48.9
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 2.2e-12 75.9 68 57.4
SGA_v2.0_scaffold146G36260 Striga asiatica HOM05D022033 ORTHO05D020747 5.0e-12 74.7 68 57.4
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 6.5e-12 74.3 66 59.1
SGA_v2.0_scaffold186G40148 Striga asiatica HOM05D008620 ORTHO05D011304 3.6e-10 68.6 89 47.2
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 3.0e-09 65.5 82 47.6
SalBow5G0621 Salvia bowleyana HOM05D008620 ORTHO05D011304 5.1e-09 64.7 45 66.7
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 1.9e-08 62.8 75 52.0
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 4.3e-08 61.6 67 50.7
Os03g0430575 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 5.7e-08 61.2 106 40.6
Lsat_1_v5_gn_8_115540 Lactuca sativa HOM05D008620 ORTHO05D011304 1.3e-07 60.1 69 52.2
Zm00001eb237130 Zea mays HOM05D008620 ORTHO05D011304 1.1e-06 57.0 60 56.7
FAN26G1174 Fragaria x ananassa HOM05D008620 ORTHO05D025601 5.3e-06 54.7 43 62.8


User provided reference genes

Program Settings