Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33061 Striga asiatica HOM05D014413 ORTHO05D000754 4.5e-64 247.7 117 100.0
SalBow6G2036 Salvia bowleyana HOM05D000957 ORTHO05D000754 1.1e-17 93.6 64 67.2
Migut.D00032 Erythranthe guttata HOM05D000957 ORTHO05D000754 1.2e-16 90.1 64 67.2
MSTRG.21721 Avicennia marina HOM05D000957 ORTHO05D000754 6.2e-13 77.8 63 58.7
Oeu052571.2 Olea europaea HOM05D000957 ORTHO05D000754 1.4e-12 76.6 68 51.5
Lsat_1_v5_gn_8_167361 Lactuca sativa HOM05D000957 ORTHO05D000754 1.8e-12 76.3 68 48.5
Nitab4.5_0000363g0080 Nicotiana tabacum HOM05D000957 ORTHO05D000754 1.8e-12 76.3 68 51.5
Nitab4.5_0003324g0160 Nicotiana tabacum HOM05D000957 ORTHO05D000754 5.2e-12 74.7 68 51.5
unitig_60.g25649 Utricularia gibba HOM05D000957 ORTHO05D000754 5.2e-12 74.7 59 57.6
CSS0036056 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 6.8e-12 74.3 68 52.9
Solyc06g009380.3 Solanum lycopersicum HOM05D000957 ORTHO05D000754 2.0e-11 72.8 79 41.8
Peaxi162Scf00058g00219 Petunia axillaris HOM05D000957 ORTHO05D000754 2.6e-11 72.4 64 53.1
Actinidia06386 Actinidia chinensis HOM05D000957 ORTHO05D000754 3.4e-11 72.0 63 54.0
vmacro02373 Vaccinium macrocarpon HOM05D000957 ORTHO05D000754 3.4e-11 72.0 72 52.8
SGA_v2.0_scaffold12G06008 Striga asiatica HOM05D014413 ORTHO05D400594 4.4e-11 71.6 77 51.9
CAN.G1280.42 Capsicum annuum HOM05D000957 ORTHO05D000754 5.8e-11 71.2 64 48.4
Sopen06g004110 Solanum pennellii HOM05D000957 ORTHO05D000754 5.8e-11 71.2 63 49.2
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 7.5e-11 70.9 79 45.6
CANSAT25G3908 Cannabis sativa HOM05D000957 ORTHO05D000754 9.9e-11 70.5 60 51.7
DCAR_005731 Daucus carota HOM05D000957 ORTHO05D000754 9.9e-11 70.5 84 39.3
Dinv33156 Davidia involucrata HOM05D000957 ORTHO05D000754 2.2e-10 69.3 66 51.5
Hma1.2p1_0484F.1_g162870 Hydrangea macrophylla HOM05D000957 ORTHO05D000754 2.9e-10 68.9 85 43.5
Hund09676 Selenicereus undatus HOM05D000957 ORTHO05D000754 2.9e-10 68.9 60 53.3
PGSC0003DMG400007296 Solanum tuberosum HOM05D000957 ORTHO05D000754 3.7e-10 68.6 80 41.2
AUR62011738 Chenopodium quinoa HOM05D000957 ORTHO05D000754 6.4e-10 67.8 61 50.8
Nn4g25421 Nelumbo nucifera HOM05D000957 ORTHO05D000754 1.1e-09 67.0 63 46.0
SGA_v2.0_scaffold272G46384 Striga asiatica HOM05D014413 ORTHO05D402281 1.9e-09 66.2 34 91.2
SGA_v2.0_scaffold54G19498 Striga asiatica HOM05D014413 ORTHO05D402424 9.2e-09 63.9 33 90.9
Cfa004874 Carpinus fangiana HOM05D000957 ORTHO05D000754 1.2e-08 63.5 64 42.2
ClCG10G011740 Citrullus lanatus HOM05D000957 ORTHO05D000754 1.2e-08 63.5 69 49.3
Lj1A11T73 Lonicera japonica HOM05D000957 ORTHO05D000754 1.2e-08 63.5 68 42.6
Haze_05115 Corylus avellana HOM05D001974 ORTHO05D001995 1.6e-08 63.2 59 44.1
PSO210G6113 Papaver somniferum HOM05D000957 ORTHO05D000754 1.6e-08 63.2 59 45.8
CsaV3_3G031600 Cucumis sativus L. HOM05D000957 ORTHO05D000754 4.6e-08 61.6 66 47.0
Cfa004876 Carpinus fangiana HOM05D000957 ORTHO05D000754 6.0e-08 61.2 63 41.3
MD17G1280800 Malus domestica HOM05D000957 ORTHO05D000754 6.0e-08 61.2 59 47.5
EL10As5g23583 Beta vulgaris HOM05D000957 ORTHO05D000754 7.8e-08 60.8 63 44.4
Ciclev10021203m.g Citrus clementina HOM05D000957 ORTHO05D000754 7.8e-08 60.8 62 46.8
Os07g0658100 Oryza sativa ssp. japonica HOM05D000957 ORTHO05D000754 1.0e-07 60.5 63 49.2
Sed0006845 Sechium edule HOM05D000957 ORTHO05D000754 1.0e-07 60.5 69 46.4
Aqoxy2G02570 Aquilegia oxysepala HOM05D000957 ORTHO05D000754 1.3e-07 60.1 58 48.3
MELO3C012914.2 Cucumis melo HOM05D000957 ORTHO05D000754 1.3e-07 60.1 66 45.5
Aqoxy2G02571 Aquilegia oxysepala HOM05D000957 ORTHO05D000754 2.3e-07 59.3 58 51.7
Prupe.3G004700 Prunus persica HOM05D000957 ORTHO05D000754 2.3e-07 59.3 58 48.3
QL12p034311 Quercus lobata HOM05D000957 ORTHO05D000754 5.1e-07 58.2 59 44.1
Zm00001eb110710 Zea mays HOM05D000957 ORTHO05D000754 6.6e-07 57.8 63 46.0
CiPaw.07G122900 Carya illinoinensis HOM05D000957 ORTHO05D000754 8.6e-07 57.4 59 42.4
PSO210G1313 Papaver somniferum HOM05D000957 ORTHO05D000754 1.5e-06 56.6 63 39.7
RcHm_v2.0_Chr3g0486601 Rosa chinensis HOM05D000957 ORTHO05D000754 1.5e-06 56.6 59 44.1
COL.COLO4_23166 Corchorus olitorius HOM05D000957 ORTHO05D000754 1.9e-06 56.2 59 45.8
FAN26G1592 Fragaria x ananassa HOM05D000957 ORTHO05D000754 2.5e-06 55.8 59 40.7
FAN28G1740 Fragaria x ananassa HOM05D000957 ORTHO05D000754 2.5e-06 55.8 59 40.7
FvH4_1g26510 Fragaria vesca HOM05D000957 ORTHO05D000754 5.6e-06 54.7 59 40.7
FAN19G0349 Fragaria x ananassa HOM05D000957 ORTHO05D000754 5.6e-06 54.7 59 40.7
PSO761G0459 Papaver somniferum HOM05D000957 ORTHO05D000754 5.6e-06 54.7 63 38.1
HanXRQChr13g0414431 Helianthus annuus HOM05D000957 ORTHO05D000754 7.3e-06 54.3 78 41.0


User provided reference genes

Program Settings