Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.7e-141 505.0 279 100.0
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 7.2e-68 261.5 324 53.4
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.0e-46 190.3 344 37.8
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 3.5e-46 189.5 330 36.7
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 2.5e-44 183.3 351 37.6
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 2.5e-44 183.3 330 37.9
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 4.2e-44 182.6 320 37.8
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 9.5e-44 181.4 330 37.6
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 4.7e-43 179.1 311 38.9
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 6.1e-43 178.7 344 35.2
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 6.1e-43 178.7 297 41.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 6.1e-43 178.7 351 35.0
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.0e-42 177.9 297 41.4
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.4e-42 177.6 343 36.2
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 5.2e-42 175.6 343 35.9
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.2e-42 175.6 312 38.8
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.6e-41 173.3 283 38.5
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.6e-41 173.3 293 39.9
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.4e-41 172.6 356 35.7
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 4.4e-41 172.6 340 35.3
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 7.5e-41 171.8 331 36.9
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 7.5e-41 171.8 353 35.7
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.3e-40 171.0 343 36.7
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 2.2e-40 170.2 351 35.0
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.7e-40 169.5 343 35.6
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 3.7e-40 169.5 355 35.5
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.9e-40 169.1 353 34.8
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 4.9e-40 169.1 343 35.9
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 8.3e-40 168.3 336 36.6
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 8.3e-40 168.3 343 35.6
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 1.8e-39 167.2 338 36.7
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 7.0e-39 165.2 341 34.6
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.2e-39 164.9 347 34.6
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.2e-38 164.5 334 33.2
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.6e-38 164.1 325 34.8
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.0e-38 163.7 346 34.1
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.7e-38 163.3 343 34.7
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.0e-37 161.4 319 34.5
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.0e-37 161.4 319 34.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.3e-37 160.2 340 34.7
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 2.9e-37 159.8 348 34.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 3.8e-37 159.5 340 37.9
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 3.8e-37 159.5 357 33.6
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.8e-37 159.5 319 34.5
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.8e-37 159.5 339 34.8
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 8.6e-37 158.3 338 34.9
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.9e-36 157.1 331 35.6
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.2e-35 154.5 347 33.1
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.1e-35 152.1 316 34.2
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 6.1e-35 152.1 305 36.4
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 8.0e-35 151.8 330 34.8
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.0e-34 151.4 287 35.9
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.4e-34 151.0 320 34.1
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.3e-34 150.2 349 33.2
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.0e-34 149.8 319 36.1
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 3.0e-34 149.8 339 33.9
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 6.8e-34 148.7 350 33.4
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 4.4e-33 146.0 331 32.6
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 4.4e-33 146.0 321 33.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 2.9e-32 143.3 344 31.1
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.7e-32 142.9 313 33.9
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 8.3e-32 141.7 345 32.8
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.4e-31 141.0 306 35.9
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.7e-30 136.7 272 36.8
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 7.8e-30 135.2 337 34.7
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.0e-29 134.8 313 31.3
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.0e-29 134.8 345 31.3
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.0e-29 134.8 298 34.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 8.6e-29 131.7 297 32.0
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.5e-28 131.0 292 32.9
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.5e-28 131.0 292 32.9
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.9e-28 130.6 348 30.5
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 3.3e-28 129.8 284 33.5
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 2.1e-27 127.1 237 38.4
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 2.1e-27 127.1 237 38.4
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.7e-27 125.9 282 34.4
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.8e-26 124.0 260 36.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.2e-25 121.3 283 33.9
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 7.5e-25 118.6 235 36.2
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.3e-24 117.9 203 39.4
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.9e-24 116.7 140 47.9
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 8.3e-24 115.2 279 33.7
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 5.4e-23 112.5 129 48.8
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 2.7e-22 110.2 265 33.2
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.1e-20 104.8 97 54.6
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.5e-20 104.4 302 33.4
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 2.5e-20 103.6 312 32.4
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 3.3e-20 103.2 127 50.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 5.6e-20 102.4 314 31.5
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 5.6e-20 102.4 314 31.5
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 7.3e-20 102.1 314 31.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 7.3e-20 102.1 306 31.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 7.3e-20 102.1 299 32.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 9.5e-20 101.7 308 31.8
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.2e-19 101.3 305 31.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 2.8e-19 100.1 301 29.9
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 8.1e-19 98.6 304 32.2
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 2.3e-18 97.1 275 28.4
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 6.8e-18 95.5 306 30.7
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 2.0e-17 94.0 273 28.6
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.3e-16 91.3 288 30.9
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 1.9e-15 87.4 255 31.0
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 4.1e-15 86.3 243 30.0
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.1e-14 84.0 187 31.6
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 3.5e-14 83.2 141 37.6
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.3e-13 81.3 279 27.2
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 2.5e-12 77.0 255 27.1
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 9.5e-12 75.1 210 29.5
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 8.9e-10 68.6 182 29.7
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.9e-08 62.8 132 33.3
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.9e-08 62.8 132 33.3
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 6.4e-08 62.4 239 25.9


User provided reference genes

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