Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 3.5e-164 583.2 299 100.0
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 5.1e-94 350.1 303 63.0
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 5.4e-88 330.1 305 59.3
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 5.4e-88 330.1 305 59.3
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 4.6e-87 327.0 307 59.0
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 2.1e-71 275.0 311 52.1
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 9.9e-66 256.1 291 51.5
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 1.1e-53 216.1 297 44.1
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 6.2e-52 210.3 297 42.4
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 1.8e-51 208.8 245 47.8
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 5.3e-51 207.2 301 41.9
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 3.4e-50 204.5 304 42.4
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.0e-49 203.0 307 42.0
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.3e-49 202.6 304 43.4
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 1.1e-48 199.5 298 43.0
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 1.4e-48 199.1 228 48.2
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.2e-48 198.0 300 43.7
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 3.2e-48 198.0 273 45.1
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 4.2e-48 197.6 297 42.1
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 1.2e-47 196.1 227 45.8
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 1.6e-47 195.7 306 42.8
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.6e-47 195.7 236 45.8
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 3.5e-47 194.5 227 47.1
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 3.9e-46 191.0 306 42.2
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 8.7e-46 189.9 301 42.2
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 1.9e-45 188.7 244 44.3
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 3.3e-45 188.0 303 41.6
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 3.3e-45 188.0 306 41.8
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 7.4e-45 186.8 300 41.3
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 2.8e-44 184.9 228 45.2
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 2.8e-44 184.9 251 40.6
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 1.1e-43 183.0 229 44.1
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 1.4e-43 182.6 225 43.6
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 1.4e-43 182.6 284 41.5
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 2.4e-43 181.8 228 43.0
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 4.1e-43 181.0 304 39.5
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 4.1e-43 181.0 228 44.3
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 4.1e-43 181.0 304 38.8
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 4.1e-43 181.0 226 44.2
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 5.3e-43 180.6 296 37.2
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 5.9e-42 177.2 227 44.1
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 5.9e-42 177.2 228 44.7
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 7.7e-42 176.8 304 38.2
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 1.3e-41 176.0 298 37.9
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.3e-41 176.0 203 45.8
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 1.3e-41 176.0 234 44.0
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 2.9e-41 174.9 227 43.6
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 1.4e-40 172.6 302 36.1
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 4.2e-40 171.0 304 37.5
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.2e-40 171.0 280 40.7
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 5.5e-40 170.6 304 37.5
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 7.2e-40 170.2 327 38.8
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 1.2e-39 169.5 281 39.5
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 4.6e-39 167.5 304 37.2
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 4.6e-39 167.5 230 41.3
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.0e-38 166.4 229 44.5
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 1.0e-38 166.4 236 41.1
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 3.9e-38 164.5 276 39.1
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 5.1e-38 164.1 281 37.4
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 1.1e-37 162.9 226 43.4
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 2.5e-37 161.8 226 43.4
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 1.7e-36 159.1 231 42.0
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.7e-36 159.1 232 40.5
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 2.2e-36 158.7 248 42.7
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 2.2e-36 158.7 206 42.2
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 3.7e-36 157.9 318 37.1
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 4.8e-36 157.5 229 41.5
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 2.4e-35 155.2 226 39.4
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 4.1e-35 154.5 231 40.3
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.5e-34 152.5 254 39.8
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 2.0e-34 152.1 288 39.9
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 2.0e-34 152.1 256 40.2
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 1.3e-33 149.4 307 35.8
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 6.5e-33 147.1 233 35.2
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 4.2e-32 144.4 175 46.9
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 1.2e-31 142.9 259 39.4
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 2.1e-31 142.1 126 54.0
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 1.3e-28 132.9 173 41.6
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 4.5e-26 124.4 146 47.3
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 1.3e-25 122.9 146 46.6
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 6.5e-25 120.6 102 55.9
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 1.1e-24 119.8 207 35.7
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 1.5e-24 119.4 198 38.9
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 1.6e-23 115.9 232 34.1
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 8.0e-23 113.6 198 37.9
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 8.0e-23 113.6 99 55.6
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.4e-22 112.8 158 42.4
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 3.9e-22 111.3 227 37.4
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 8.8e-22 110.2 186 36.0
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 2.6e-21 108.6 179 36.3
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 3.1e-19 101.7 232 34.1
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 9.1e-19 100.1 168 40.5
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.7e-15 88.6 135 40.7
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 3.4e-13 81.6 70 55.7
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 4.4e-13 81.3 193 34.2
ClCG02G014020 Citrullus lanatus HOM05D005764 ORTHO05D006600 5.3e-11 74.3 188 33.0
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.5e-10 71.6 100 36.0
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 2.9e-09 68.6 192 28.1
SEGI_07640 Sequoiadendron giganteum HOM05D007763 ORTHO05D009537 5.0e-09 67.8 197 27.4
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 1.1e-08 66.6 191 27.2
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.5e-08 66.2 186 34.4
Sed0013038 Sechium edule HOM05D005764 ORTHO05D006600 1.5e-08 66.2 192 30.7
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 3.2e-08 65.1 187 27.3
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 4.2e-08 64.7 233 28.8
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 5.5e-08 64.3 193 28.0
SalBow7G2732 Salvia bowleyana HOM05D005764 ORTHO05D006600 2.7e-07 62.0 204 28.9
Zm00001eb151970 Zea mays HOM05D059268 ORTHO05D009424 2.7e-07 62.0 102 34.3
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 3.6e-07 61.6 232 23.7
vmacro19173 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 3.6e-07 61.6 183 30.1
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 4.7e-07 61.2 184 27.2
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 6.1e-07 60.8 189 28.0
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 8.0e-07 60.5 101 33.7
Psat5g196040 Pisum sativum HOM05D006888 ORTHO05D008371 1.0e-06 60.1 196 27.6
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.4e-06 59.7 246 22.8
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 1.4e-06 59.7 184 26.1
Peaxi162Scf00222g00211 Petunia axillaris HOM05D004824 ORTHO05D003903 1.8e-06 59.3 113 31.9
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 3.0e-06 58.5 203 27.6
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 4.0e-06 58.2 256 25.0
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 5.2e-06 57.8 180 25.6
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 5.2e-06 57.8 187 27.3
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 5.2e-06 57.8 94 34.0
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 6.8e-06 57.4 195 26.7
Lsat_1_v5_gn_4_84661 Lactuca sativa HOM05D005764 ORTHO05D006600 6.8e-06 57.4 197 24.4
Manes.01G179300 Manihot esculenta HOM05D007455 ORTHO05D009431 8.8e-06 57.0 163 27.6
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 8.8e-06 57.0 106 30.2


User provided reference genes

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