Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33031 Striga asiatica HOM05D009522 ORTHO05D009846 1.8e-198 696.4 584 100.0
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 7.6e-11 73.2 68 60.3
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.2e-10 71.6 47 78.7
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 2.2e-10 71.6 47 78.7
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 6.4e-10 70.1 50 72.0
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 6.4e-10 70.1 47 76.6
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 1.9e-09 68.6 47 74.5
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 1.9e-09 68.6 47 74.5
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 4.2e-09 67.4 66 59.1
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 9.3e-09 66.2 40 82.5
Nitab4.5_0004131g0040 Nicotiana tabacum HOM05D017514 ORTHO05D009846 1.2e-08 65.9 40 82.5
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 4.6e-08 63.9 40 77.5
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 4.6e-08 63.9 40 80.0
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 7.9e-08 63.2 49 71.4
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 1.0e-07 62.8 48 72.9
PGSC0003DMG400029579 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.3e-07 62.4 38 81.6
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 1.7e-07 62.0 41 75.6
Sopen08g022670 Solanum pennellii HOM05D009522 ORTHO05D009846 1.7e-07 62.0 41 75.6
Nitab4.5_0000502g0110 Nicotiana tabacum HOM05D009522 ORTHO05D009846 3.0e-07 61.2 48 70.8
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 3.0e-07 61.2 43 72.1
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 5.1e-07 60.5 40 77.5
unitig_32.g10944 Utricularia gibba HOM05D009522 ORTHO05D009846 6.6e-07 60.1 38 78.9
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 8.7e-07 59.7 40 75.0
Medtr3g108830 Medicago truncatula HOM05D013197 ORTHO05D009846 1.1e-06 59.3 41 70.7
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 1.5e-06 58.9 40 70.0
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 1.5e-06 58.9 41 70.7
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 1.9e-06 58.5 38 73.7
Solyc08g006440.4 Solanum lycopersicum HOM05D017514 ORTHO05D009846 1.9e-06 58.5 48 66.7
Sopen08g002390 Solanum pennellii HOM05D017514 ORTHO05D009846 1.9e-06 58.5 48 66.7
PGSC0003DMG400026295 Solanum tuberosum HOM05D017514 ORTHO05D009846 1.9e-06 58.5 48 66.7
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 5.6e-06 57.0 51 60.8
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 5.6e-06 57.0 38 73.7
Lj7C750T8 Lonicera japonica HOM05D031498 ORTHO05D009846 9.6e-06 56.2 38 68.4
TPR.G12338 Trifolium pratense HOM05D013197 ORTHO05D012811 9.6e-06 56.2 41 70.7


User provided reference genes

Program Settings