Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 1.0e-175 620.9 366 100.0
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.3e-64 251.9 318 60.1
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.7e-53 214.9 296 57.1
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 1.8e-42 178.3 322 49.4
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.0e-38 164.9 336 47.3
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 5.0e-37 160.2 320 50.3
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 6.6e-37 159.8 322 47.2
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 6.1e-35 153.3 329 45.6
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 8.0e-35 152.9 326 45.7
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 8.3e-32 142.9 326 45.1
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 1.4e-31 142.1 326 44.8
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 3.2e-31 141.0 300 48.0
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 5.4e-31 140.2 314 47.1
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 2.0e-30 138.3 312 47.4
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 4.6e-30 137.1 207 61.4
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 4.6e-30 137.1 162 47.5
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.5e-28 132.1 325 44.6
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.9e-28 131.7 293 47.1
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 7.3e-28 129.8 309 45.6
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 9.5e-28 129.4 253 53.0
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 1.6e-27 128.6 257 52.1
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.8e-26 125.2 315 45.1
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.2e-25 122.5 338 43.8
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 2.6e-25 121.3 321 42.1
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 2.6e-25 121.3 302 46.4
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 1.1e-23 115.9 298 44.0
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.4e-23 115.5 307 45.0
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 2.0e-22 111.7 323 41.8
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.0e-22 111.7 239 40.6
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 6.0e-22 110.2 333 42.3
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 7.8e-22 109.8 254 48.0
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.7e-21 108.6 247 49.0
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.7e-21 108.6 280 45.4
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.7e-21 108.6 321 42.1
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 3.9e-21 107.5 245 52.7
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 5.0e-21 107.1 259 47.9
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 1.5e-20 105.5 295 43.7
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.5e-20 105.5 280 44.6
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 3.3e-20 104.4 326 41.1
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 3.3e-20 104.4 215 54.0
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 4.3e-20 104.0 314 42.7
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.8e-19 101.3 234 52.1
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 2.8e-19 101.3 312 41.7
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 4.7e-19 100.5 298 45.6
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 8.1e-19 99.8 250 46.0
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 1.1e-18 99.4 235 50.2
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 2.3e-18 98.2 251 48.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.3e-18 98.2 250 45.6
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 4.0e-18 97.4 228 50.9
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 5.2e-18 97.1 190 35.3
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 5.2e-18 97.1 257 45.9
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 6.8e-18 96.7 212 55.2
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 6.8e-18 96.7 242 47.5
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.2e-17 95.9 244 50.4
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 3.4e-17 94.4 234 51.3
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 7.5e-17 93.2 210 54.8
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 2.9e-16 91.3 216 50.0
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 2.9e-16 91.3 306 41.8
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.1e-15 89.4 266 45.5
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 1.4e-15 89.0 290 42.4
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 3.2e-15 87.8 289 42.6
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 9.2e-15 86.3 222 50.9
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 9.2e-15 86.3 215 50.2
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 1.2e-14 85.9 182 54.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 2.1e-14 85.1 212 31.6
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 2.1e-14 85.1 306 40.8
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 3.5e-14 84.3 227 49.3
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 4.6e-14 84.0 209 46.9
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 1.0e-13 82.8 302 39.4
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 2.3e-13 81.6 225 48.4
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 5.6e-12 77.0 259 43.2
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 2.1e-11 75.1 288 41.3
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 2.8e-11 74.7 106 42.5
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 3.6e-11 74.3 106 41.5
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.1e-10 72.8 178 50.6
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 6.8e-10 70.1 182 50.5
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 2.6e-09 68.2 227 48.5
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 5.8e-09 67.0 139 31.7
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 7.6e-09 66.6 348 30.5
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 1.1e-07 62.8 162 29.6
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.2e-06 59.3 221 46.6
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.7e-06 58.2 297 38.7
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 3.5e-06 57.8 83 42.2


User provided reference genes

Program Settings