Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 0.0e+00 1427.5 730 100.0
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 0.0e+00 1083.2 734 77.1
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 1.6e-308 1062.4 733 73.9
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 9.6e-306 1053.1 734 73.6
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 1.3e-297 1026.2 709 73.8
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 1.1e-296 1023.1 733 71.2
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 2.7e-292 1008.4 733 70.7
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 7.9e-292 1006.9 732 69.9
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 7.9e-292 1006.9 725 70.3
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 9.7e-290 1000.0 733 70.7
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 1.3e-289 999.6 732 69.5
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 1.6e-289 999.2 732 69.5
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 8.2e-289 996.9 802 66.1
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 1.3e-286 989.6 730 69.2
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 2.2e-286 988.8 733 68.3
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 6.5e-286 987.3 731 67.9
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 2.5e-285 985.3 731 68.0
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 3.2e-285 984.9 731 69.5
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 7.9e-284 980.3 731 68.1
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 1.0e-283 979.9 730 68.8
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 3.9e-283 978.0 728 68.1
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 6.7e-283 977.2 733 67.7
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 1.5e-282 976.1 733 68.2
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 2.0e-282 975.7 731 68.4
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 7.4e-282 973.8 731 67.6
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 8.2e-281 970.3 732 68.0
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 9.1e-280 966.8 734 66.9
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 1.2e-279 966.5 732 66.9
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 3.6e-276 954.9 729 67.6
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 4.7e-276 954.5 729 67.1
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 1.4e-275 953.0 729 67.5
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 1.4e-275 953.0 729 67.6
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 1.5e-274 949.5 730 67.0
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.7e-274 947.6 729 67.1
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 7.4e-274 947.2 733 65.9
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 2.2e-273 945.7 732 67.1
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 2.8e-273 945.3 732 66.1
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 4.8e-273 944.5 707 68.2
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 2.6e-271 938.7 733 64.8
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 2.6e-271 938.7 731 66.1
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 4.5e-271 937.9 731 66.3
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 1.5e-269 932.9 732 65.3
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 2.5e-269 932.2 733 64.8
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 1.8e-267 926.0 743 65.5
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 5.2e-267 924.5 732 64.1
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 1.2e-266 923.3 734 64.2
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 9.7e-266 920.2 841 58.6
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 1.3e-265 919.8 718 65.7
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 5.3e-264 914.4 732 63.7
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 5.9e-263 911.0 744 63.6
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 6.5e-262 907.5 729 65.6
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 9.4e-261 903.7 733 63.8
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 1.8e-259 899.4 729 63.4
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 2.0e-258 896.0 725 64.6
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 7.0e-256 887.5 734 63.6
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 1.5e-253 879.8 736 63.7
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 1.9e-253 879.4 742 62.7
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 2.5e-253 879.0 733 61.9
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 5.2e-251 871.3 735 62.4
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 1.4e-248 863.2 738 62.1
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 4.1e-248 861.7 631 69.9
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 1.7e-246 856.3 725 62.6
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 5.0e-246 854.7 735 61.5
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 3.4e-242 842.0 730 59.0
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 1.1e-237 827.0 659 64.6
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 2.4e-232 809.3 724 57.7
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 7.0e-232 807.7 734 57.6
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 1.7e-230 803.1 725 57.4
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 3.0e-230 802.4 724 57.5
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 5.6e-229 798.1 723 57.0
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 1.6e-228 796.6 723 57.0
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 1.6e-228 796.6 724 57.0
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 1.6e-228 796.6 723 57.0
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 1.6e-228 796.6 723 57.0
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 4.7e-228 795.0 724 56.9
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 2.3e-227 792.7 724 56.8
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 2.6e-226 789.3 726 57.0
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 9.5e-221 770.8 671 63.6
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 8.4e-217 757.7 734 54.6
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 8.4e-217 757.7 730 54.7
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 1.4e-216 756.9 587 66.1
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 2.4e-216 756.1 730 54.4
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 2.6e-210 736.1 470 79.1
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 4.8e-196 688.7 671 54.7
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 9.0e-187 657.9 743 49.7
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 7.1e-184 648.3 489 65.6
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 1.9e-176 623.6 672 50.3
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 3.2e-176 622.9 586 57.5
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 1.7e-169 600.5 690 49.3
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 6.3e-164 582.0 680 47.1
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 2.6e-162 576.6 437 68.6
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 8.5e-161 571.6 680 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 3.8e-145 519.6 676 45.3
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 4.0e-142 509.6 438 62.8
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 2.0e-141 507.3 515 53.0
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.1e-136 491.5 438 56.2
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 2.0e-130 470.7 477 54.7
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 5.8e-125 452.6 668 38.0
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 9.2e-123 445.3 385 60.8
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.8e-119 433.7 400 55.0
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 4.3e-112 409.8 314 65.6
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 2.0e-109 401.0 398 55.3
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 2.2e-108 397.5 335 60.3
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 6.0e-98 362.8 319 60.5
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 1.7e-97 361.3 325 60.3
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 2.8e-95 354.0 268 68.7
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 6.4e-92 342.8 289 61.9
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 8.7e-89 332.4 228 71.1
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.0e-81 308.9 270 58.5
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 8.1e-79 299.3 237 62.0
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.4e-75 288.5 213 66.7
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 3.2e-51 207.6 160 68.8
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 4.4e-48 197.2 153 66.7
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 1.7e-44 185.3 148 58.1
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 3.6e-34 151.0 146 54.8
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 1.1e-30 139.4 764 25.0
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 1.0e-25 122.9 104 63.5
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.3e-20 105.9 71 71.8
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 4.4e-16 90.9 69 60.9
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 1.9e-11 75.5 64 65.6
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 2.6e-08 65.1 45 71.1
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 4.1e-06 57.8 694 21.2
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 4.1e-06 57.8 52 46.2


User provided reference genes

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