Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32953 Striga asiatica HOM05D006986 ORTHO05D008714 4.9e-77 291.2 162 100.0
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 1.2e-35 153.7 161 60.9
SalBow2G1752 Salvia bowleyana HOM05D006986 ORTHO05D008714 1.2e-35 153.7 166 61.4
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 4.4e-33 145.2 172 58.1
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 9.7e-33 144.1 166 50.6
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 1.3e-32 143.7 182 47.3
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 1.7e-32 143.3 164 55.5
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 2.2e-32 142.9 172 48.8
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 6.3e-32 141.4 181 47.5
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 8.2e-32 141.0 154 54.5
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 1.4e-31 140.2 181 47.5
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 1.8e-31 139.8 181 47.0
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 1.2e-30 137.1 168 48.2
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 5.9e-30 134.8 172 57.6
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 7.7e-30 134.4 166 50.6
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 2.9e-29 132.5 171 49.1
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 8.5e-29 131.0 171 48.5
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 1.1e-28 130.6 171 49.1
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 1.5e-28 130.2 159 50.3
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 1.9e-28 129.8 166 50.0
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 3.2e-28 129.0 179 46.4
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 5.5e-28 128.3 156 53.2
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 1.2e-27 127.1 169 52.1
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 2.1e-27 126.3 148 53.4
Thecc.09G357000 Theobroma cacao HOM05D006986 ORTHO05D008714 6.1e-27 124.8 150 51.3
Nn2g10992 Nelumbo nucifera HOM05D006986 ORTHO05D008714 8.0e-27 124.4 175 50.3
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 1.4e-26 123.6 163 43.6
CiPaw.13G069900 Carya illinoinensis HOM05D006986 ORTHO05D008714 1.8e-26 123.2 158 54.4
Glyma.11G164400 Glycine max HOM05D006986 ORTHO05D008714 4.0e-26 122.1 151 56.3
Medtr3g031370 Medicago truncatula HOM05D006986 ORTHO05D008714 8.8e-26 120.9 163 49.1
DCAR_007347 Daucus carota HOM05D006986 ORTHO05D008714 1.1e-25 120.6 174 44.3
Peaxi162Scf00055g00052 Petunia axillaris HOM05D006986 ORTHO05D008714 2.0e-25 119.8 171 45.6
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 5.7e-25 118.2 162 45.1
Duzib168G0630 Durio zibethinus HOM05D006986 ORTHO05D008714 5.7e-25 118.2 168 48.8
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 5.7e-25 118.2 168 48.2
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 7.5e-25 117.9 167 46.1
VMungo0540G2396 Vigna mungo HOM05D006986 ORTHO05D008714 9.7e-25 117.5 150 55.3
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 1.3e-24 117.1 152 49.3
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 2.8e-24 115.9 183 47.0
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 6.3e-24 114.8 153 55.6
Glyma.18G057600 Glycine max HOM05D006986 ORTHO05D008714 6.3e-24 114.8 153 55.6
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 6.3e-24 114.8 147 48.3
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 1.8e-23 113.2 166 43.4
Cpa.g.sc2.365 Carica papaya HOM05D006986 ORTHO05D008714 3.1e-23 112.5 158 46.2
Phvul.006G073400 Phaseolus vulgaris HOM05D006986 ORTHO05D008714 3.1e-23 112.5 150 54.7
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 3.1e-23 112.5 176 40.9
Ca_15003_v3 Cicer arietinum L. HOM05D006986 ORTHO05D008714 5.3e-23 111.7 171 52.6
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 5.3e-23 111.7 159 47.8
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 5.3e-23 111.7 172 45.3
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 7.0e-23 111.3 166 45.8
Manes.18G142700 Manihot esculenta HOM05D006986 ORTHO05D008714 9.1e-23 110.9 156 42.3
TAR636G2132 Trochodendron aralioides HOM05D006986 ORTHO05D008714 1.2e-22 110.5 173 39.9
Gohir.D03G142700 Gossypium hirsutum HOM05D006986 ORTHO05D008714 2.7e-22 109.4 172 45.9
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 3.5e-22 109.0 155 44.5
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 3.5e-22 109.0 155 44.5
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 3.5e-22 109.0 155 44.5
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 4.5e-22 108.6 152 44.1
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 4.5e-22 108.6 154 44.8
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 7.7e-22 107.8 133 52.6
ClCG03G000370 Citrullus lanatus HOM05D006986 ORTHO05D008714 1.0e-21 107.5 163 41.1
Sabra09G0059300 Salix brachista HOM05D006986 ORTHO05D008714 1.0e-21 107.5 175 42.3
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 1.3e-21 107.1 153 53.6
THA.LOC104800770 Tarenaya hassleriana HOM05D006986 ORTHO05D008714 2.2e-21 106.3 152 48.0
Ah.08g215140 Amaranthus hybridus HOM05D006986 ORTHO05D008714 8.5e-21 104.4 152 42.8
Peaxi162Scf00222g00001 Petunia axillaris HOM05D006986 ORTHO05D008714 1.1e-20 104.0 142 47.9
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 1.5e-20 103.6 154 50.6
Sed0010409 Sechium edule HOM05D006986 ORTHO05D008714 1.9e-20 103.2 144 43.1
AUR62009676 Chenopodium quinoa HOM05D006986 ORTHO05D008714 2.5e-20 102.8 160 42.5
HanXRQChr02g0033811 Helianthus annuus HOM05D006986 ORTHO05D008714 7.2e-20 101.3 154 52.6
Peaxi162Scf01176g00002 Petunia axillaris HOM05D006986 ORTHO05D008714 9.4e-20 100.9 142 46.5
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 9.4e-20 100.9 177 44.6
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 9.4e-20 100.9 177 44.6
Gohir.A03G025800 Gossypium hirsutum HOM05D006986 ORTHO05D008714 3.6e-19 99.0 174 43.7
Gorai.003G149800 Gossypium raimondii HOM05D006986 ORTHO05D008714 4.7e-19 98.6 174 43.7
EL10Ac7g15912 Beta vulgaris HOM05D000133 ORTHO05D000259 8.0e-19 97.8 153 45.1
ECA240G2743 Erigeron canadensis HOM05D006986 ORTHO05D008714 8.0e-19 97.8 162 46.3
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.4e-18 97.1 142 43.7
CANSAT54G0324 Cannabis sativa HOM05D006986 ORTHO05D008714 4.0e-18 95.5 167 43.1
CARHR006710 Cardamine hirsuta HOM05D006986 ORTHO05D008714 6.8e-18 94.7 155 47.1
COL.COLO4_11142 Corchorus olitorius HOM05D006986 ORTHO05D008714 6.8e-18 94.7 93 53.8
AT1G07020 Arabidopsis thaliana HOM05D006986 ORTHO05D008714 1.2e-17 94.0 147 46.9
Carub.0001s0631 Capsella rubella HOM05D006986 ORTHO05D008714 1.5e-17 93.6 154 45.5
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 1.5e-17 93.6 160 38.1
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 5.7e-17 91.7 130 54.6
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 9.8e-17 90.9 142 40.8
AUR62001879 Chenopodium quinoa HOM05D006986 ORTHO05D008714 1.3e-16 90.5 159 40.3
Aa31LG1G8070 Aethionema arabicum HOM05D006986 ORTHO05D008714 2.2e-16 89.7 150 38.0
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 2.2e-16 89.7 138 41.3
BcaB03g13411 Brassica carinata HOM05D006986 ORTHO05D008714 3.7e-16 89.0 157 39.5
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 3.7e-16 89.0 114 46.5
PSO765G0136 Papaver somniferum HOM05D006986 ORTHO05D008714 4.8e-16 88.6 168 47.0
AL1G17080 Arabidopsis lyrata HOM05D006986 ORTHO05D008714 6.3e-16 88.2 148 45.9
PSO170G2557 Papaver somniferum HOM05D006986 ORTHO05D008714 8.3e-16 87.8 135 40.7
Prupe.6G049000 Prunus persica HOM05D006986 ORTHO05D008714 1.8e-15 86.7 166 43.4
BolC8t47074H Brassica oleracea HOM05D006986 ORTHO05D008714 2.4e-15 86.3 155 43.9
PSO339G5371 Papaver somniferum HOM05D006986 ORTHO05D008714 3.1e-15 85.9 133 45.1
A08p35810 Brassica napus HOM05D006986 ORTHO05D008714 4.1e-15 85.5 158 43.0
BraA08t35488Z Brassica rapa HOM05D006986 ORTHO05D008714 4.1e-15 85.5 158 43.0
Thhalv10008798m.g Eutrema salsugineum HOM05D006986 ORTHO05D008714 5.4e-15 85.1 151 38.4
C08p02790 Brassica napus HOM05D006986 ORTHO05D008714 9.1e-15 84.3 157 44.6
Ciclev10029398m.g Citrus clementina HOM05D006986 ORTHO05D008714 9.1e-15 84.3 181 44.2
Sp1g05740 Schrenkiella parvula HOM05D006986 ORTHO05D008714 1.2e-14 84.0 150 37.3
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 1.2e-14 84.0 143 37.1
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 5.9e-14 81.6 95 50.5
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 1.2e-09 67.4 161 34.8
Glyma.06G163400 Glycine max HOM05D006986 ORTHO05D008714 1.3e-08 63.9 49 57.1
FvH4_3g21494 Fragaria vesca HOM05D006986 ORTHO05D008714 2.8e-08 62.8 61 49.2
PSO349G0135 Papaver somniferum HOM05D006986 ORTHO05D008714 2.8e-08 62.8 65 52.3
Hma1.2p1_1761F.1_g301290 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 4.9e-08 62.0 41 68.3
Hma1.2p1_1761F.1_g301295 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 4.9e-08 62.0 41 68.3
CBR_g8142 Chara braunii HOM05D006986 ORTHO05D008714 8.3e-08 61.2 70 44.3
SEGI_39902 Sequoiadendron giganteum HOM05D006986 ORTHO05D008714 7.7e-06 54.7 134 34.3


User provided reference genes

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