Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 5.8e-80 300.8 152 100.0
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.7e-34 149.8 88 81.8
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.8e-34 149.1 88 81.8
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 2.8e-34 149.1 86 84.9
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 2.8e-34 149.1 86 84.9
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 8.2e-34 147.5 88 80.7
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 1.1e-33 147.1 86 81.4
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.1e-33 147.1 88 80.7
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.4e-33 146.7 88 79.5
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 1.4e-33 146.7 88 79.5
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.8e-33 146.4 86 81.4
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.8e-33 146.4 88 79.5
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 1.8e-33 146.4 88 80.7
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.4e-33 146.0 91 76.9
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 3.1e-33 145.6 88 78.4
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 3.1e-33 145.6 90 76.7
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 4.1e-33 145.2 88 78.4
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 5.3e-33 144.8 88 79.5
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 7.0e-33 144.4 88 76.1
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 7.0e-33 144.4 88 79.5
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 7.0e-33 144.4 88 79.5
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 7.0e-33 144.4 88 79.5
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 7.0e-33 144.4 88 79.5
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 9.1e-33 144.1 85 81.2
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.2e-32 143.7 88 80.7
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 1.2e-32 143.7 88 77.3
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.6e-32 143.3 85 80.0
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.0e-32 142.9 87 80.5
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.0e-32 142.9 88 79.5
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 2.0e-32 142.9 88 77.3
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.0e-32 142.9 88 78.4
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.0e-32 142.9 90 74.4
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 2.7e-32 142.5 88 79.5
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 4.5e-32 141.7 86 80.2
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.9e-32 141.4 95 73.7
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 5.9e-32 141.4 88 77.3
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 7.7e-32 141.0 88 77.3
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.7e-31 139.8 88 78.4
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.7e-31 139.8 88 75.0
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.7e-31 139.8 107 64.5
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 2.2e-31 139.4 88 77.3
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 2.9e-31 139.0 88 75.0
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 3.8e-31 138.7 87 78.2
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 3.8e-31 138.7 88 76.1
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 3.8e-31 138.7 88 76.1
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 3.8e-31 138.7 88 76.1
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 5.0e-31 138.3 88 75.0
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 5.0e-31 138.3 86 79.1
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 5.0e-31 138.3 88 75.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 5.0e-31 138.3 88 75.0
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.1e-30 137.1 88 76.1
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.5e-30 136.7 87 75.9
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 3.2e-30 135.6 86 74.4
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 7.2e-30 134.4 88 73.9
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 9.4e-30 134.0 88 72.7
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 9.4e-30 134.0 124 61.3
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-29 132.9 82 79.3
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 2.7e-29 132.5 88 73.9
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 6.1e-29 131.3 88 71.6
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 8.0e-29 131.0 88 72.7
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 8.0e-29 131.0 87 72.4
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.4e-28 130.2 83 78.3
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.4e-28 130.2 82 78.0
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 3.0e-28 129.0 86 73.3
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 3.0e-28 129.0 86 73.3
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 3.0e-28 129.0 86 72.1
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 8.8e-28 127.5 85 74.1
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.2e-27 127.1 92 66.3
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-27 127.1 90 71.1
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 1.2e-27 127.1 86 70.9
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.5e-27 126.7 83 77.1
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 2.6e-27 125.9 86 73.3
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 3.4e-27 125.6 86 69.8
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 7.5e-27 124.4 92 66.3
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 1.7e-26 123.2 74 81.1
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 2.2e-26 122.9 86 66.3
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.8e-26 122.5 86 67.4
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.7e-26 122.1 86 66.3
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.4e-25 120.2 83 69.9
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.8e-25 119.8 86 64.0
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 3.1e-25 119.0 84 66.7
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 3.1e-25 119.0 81 69.1
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 4.1e-25 118.6 83 69.9
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 7.0e-25 117.9 83 68.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 7.0e-25 117.9 83 69.9
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.2e-24 117.1 82 69.5
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 1.2e-24 117.1 73 76.7
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 1.2e-24 117.1 85 68.2
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 7.7e-24 114.4 87 63.2
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.3e-23 113.6 83 65.1
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.7e-23 113.2 84 65.5
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 8.5e-23 110.9 84 64.3
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 8.5e-23 110.9 84 64.3
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.5e-22 110.2 82 64.6
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.9e-22 109.8 82 64.6
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 2.5e-22 109.4 82 63.4
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 2.5e-22 109.4 103 52.4
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 3.2e-22 109.0 86 65.1
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 3.2e-22 109.0 83 61.4
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 4.2e-22 108.6 82 63.4
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 4.2e-22 108.6 82 63.4
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 4.2e-22 108.6 82 63.4
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 4.2e-22 108.6 82 63.4
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.2e-21 107.1 85 61.2
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.2e-21 107.1 85 61.2
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.2e-20 101.7 88 59.1
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 5.2e-20 101.7 63 77.8
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 3.4e-19 99.0 60 81.7
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 5.7e-19 98.2 86 55.8
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 5.7e-19 98.2 77 61.0
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 7.5e-19 97.8 87 54.0
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 3.7e-18 95.5 63 84.1
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 3.5e-16 89.0 68 64.7
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 1.0e-15 87.4 85 54.1
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.2e-13 80.5 51 74.5
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.4e-12 77.0 60 66.7
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.0e-12 75.9 47 76.6
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 5.2e-12 75.1 82 48.8
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 2.6e-11 72.8 46 71.7
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 4.4e-11 72.0 60 58.3
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.3e-10 70.5 60 56.7
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.2e-10 69.7 70 54.3
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 1.3e-07 60.5 63 49.2
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 1.3e-07 60.5 63 49.2


User provided reference genes

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